RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 M0R143 59 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 M0R2N6 131 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 AP4M1O00189 453 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 GPR31O00270 319 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 RGS10O43665 173 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 KCNK5O95279 499 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 EGFP01133 1207 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 CALCAP01258 141 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 RPLP1P05386 114 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 HOXD8P13378 290 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 PLS3P13797 630 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 GCH1P30793 250 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 NUDT2P50583 147 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 VSX2P58304 361 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 GABARAPL2P60520 117 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 DYNLL1P63167 89 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 ISXQ2M1V0 245 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 SYT6Q5T7P8 510 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 FAXCQ5TGI0 409 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 LRRC38Q5VT99 294 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 MRNIPQ6NTE8 343 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 USP17L6PQ6QN14 398 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 LANCL3Q6ZV70 420 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 EIF3MQ7L2H7 374 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 TMPRSS7Q7RTY8 843 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 ADGRA1Q86SQ6 560 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 BIVMQ86UB2 503 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 KAT2AQ92830 837 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 KAT5Q92993 513 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 ECHDC3Q96DC8 303 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 EEF2KMTQ96G04 330 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 LRCH3Q96II8 777 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 NOL4LQ96MY1 436 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 SLITRK1Q96PX8 696 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 UPF3AQ9H1J1 476 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 C6orf50Q9HD87 102 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 PTGDR2Q9Y5Y4 395 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 A0A1W2PQ45 241 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 A0A1W2PQY0 241 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 EFCAB9A8MZ26 197 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 E7ESA3 106 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 ATP5J2-PTCD1G3V325 749 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 TEX46H3BTG2 121 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 AK1P00568 194 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 IFNA17P01571 189 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 MT-ND2P03891 347 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 VEGFAP15692 232 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 ENGP17813 658 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 PCMT1P22061 227 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 EMP2P54851 167 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 EEFSECP57772 596 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 TUBB3Q13509 450 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 CYP1B1Q16678 543 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 EXOC3L2Q2M3D2 409 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 CXorf57Q6NSI4 855 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 CD300LGQ6UXG3 332 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 ANGPTL5Q86XS5 388 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 OR4K15Q8NH41 348 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 NANOS1Q8WY41 292 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 RORBQ92753 470 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 MRGPRFQ96AM1 343 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 MTERF1Q99551 399 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 SLC30A2Q9BRI3 323 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 HINT2Q9BX68 163 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 GPR87Q9BY21 358 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 MRPL13Q9BYD1 178 aaKnown RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 BARHL1Q9BZE3 327 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 OR10A5Q9H207 317 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 PPP1R3EQ9H7J1 279 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 LPAR2Q9HBW0 351 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 CCNB1IP1Q9NPC3 277 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 LANCL2Q9NS86 450 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 NDOR1Q9UHB4 597 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 CLCA2Q9UQC9 943 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 CAMK2AQ9UQM7 478 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM184BQ9Y519 407 aaPredicted RBP7.34□□□□□ -1.23
GPNMB-201ENST00000258733 KCTD3Q9Y597 815 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 SLCO1B1Q9Y6L6 691 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 ANKRD36CQ5JPF3 1778 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 SCN4AP35499 1836 aa7.34□□□□□ -1.23
GPNMB-201ENST00000258733 C5P01031 1676 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 KIF1AQ12756 1690 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 A0A1W2PQ09 198 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 SUPT3HB4E1H0 165 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 CHADO15335 359 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 TULP3O75386 442 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 AKAP5P24588 427 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 TGFBR1P36897 503 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 KIR2DL3P43628 341 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 CDH11P55287 796 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 CNTN1Q12860 1018 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 HLXQ14774 488 aaPredicted RBP7.34□□□□□ -1.24
GPNMB-201ENST00000258733 AGKQ53H12 422 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 SLC35F1Q5T1Q4 408 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 IER5Q5VY09 327 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 C3P1Q6ZMU1 363 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 ZNF620Q6ZNG0 422 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 KANSL1Q7Z3B3 1105 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 CNTN4Q8IWV2 1026 aa7.34□□□□□ -1.24
GPNMB-201ENST00000258733 RNF148Q8N7C7 305 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms