RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PRKNO60260 465 aaPredicted RBP13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 UPK1BO75841 260 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 TGM4P49221 684 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 ITGA1P56199 1179 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 ALDH6A1Q02252 535 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 TAB1Q15750 504 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 SYT6Q5T7P8 510 aaPredicted RBP13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 OR2L8Q8NGY9 312 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 OR5P2Q8WZ92 322 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 TIMM29Q9BSF4 260 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 HMGN4O00479 90 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 CTSVO60911 334 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 CPN2P22792 545 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 ATP5A1P25705 553 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 ZNF33BQ06732 778 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 HYAL2Q12891 473 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 VASH1Q7L8A9 365 aaPredicted RBP13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 TBC1D19Q8N5T2 526 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 IQCF1Q8N6M8 205 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 CREB3L4Q8TEY5 395 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 AMDHD1Q96NU7 426 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 CTRCQ99895 268 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 EXOSC4Q9NPD3 245 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 KLF15Q9UIH9 416 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 MRPS2Q9Y399 296 aaKnown RBP13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 TICRRQ7Z2Z1 1910 aa13.8□□□□□ -0.2
TRAFD1-201ENST00000257604 NPIPA5A0A0B4J1W7 369 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 TMEM229AB2RXF0 380 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 NPIPA7E9PJI5 369 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 ADAMDEC1O15204 470 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 CTSBP07858 339 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 POU2F2P09086 479 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 NPIPA8P0DM63 369 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 HSD17B2P37059 387 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 LIM2P55344 173 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 VSX2P58304 361 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 PDE7AQ13946 482 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 PUM1Q14671 1186 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 NFATC4Q14934 902 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 ZNF630Q2M218 657 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 ZNF404Q494X3 552 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 KDM4DQ6B0I6 523 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 ABHD17CQ6PCB6 329 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 OR8H2Q8N162 312 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 DNASE1L2Q92874 299 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 CCDC3Q9BQI4 270 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 CHST8Q9H2A9 424 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 SERHL2Q9H4I8 314 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 WASH6PQ9NQA3 447 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 GPR83Q9NYM4 423 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 SLC13A4Q9UKG4 626 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 ITGB1BP2Q9UKP3 347 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 TMCC3Q9ULS5 477 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 NTNG1Q9Y2I2 539 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 ZNF780BQ9Y6R6 833 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 CACNA1CQ13936 2221 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 CELSR3Q9NYQ7 3312 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 GASTP01350 101 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 MAGEA2P43356 314 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 TARDBPQ13148 414 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 SNAP47Q5SQN1 464 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 SETD9Q8NE22 299 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 UGT2A1Q9Y4X1 527 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 NCOR1O75376 2440 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 SERTM1A2A2V5 107 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 P2RX6O15547 441 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 CCNKO75909 580 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 IFNA14P01570 189 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 THEGLP0DJG4 465 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 DDX5P17844 614 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 PPP2R1BP30154 601 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 AKT2P31751 481 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 TGFBR2P37173 567 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 ERV3-1Q14264 604 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 MAD2L1BPQ15013 274 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 NNATQ16517 81 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 THOC7Q6I9Y2 204 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 C7orf57Q8NEG2 295 aa13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 GEMIN6Q8WXD5 167 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 GAS2L1Q99501 681 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 SIRT3Q9NTG7 399 aaPredicted RBP13.79□□□□□ -0.2
TRAFD1-201ENST00000257604 FAM47E-STBD1D6RA91 191 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 SLC35G6P0C7Q6 338 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 ARAFP10398 606 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 ACVR2AP27037 513 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 MRPS15P82914 257 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 FADDQ13158 208 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 CCBE1Q6UXH8 406 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 C16orf62Q7Z3J2 963 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 MINDY2Q8NBR6 621 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 OR4D11Q8NGI4 311 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 GABRG3Q99928 467 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 HOXD1Q9GZZ0 328 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 MVB12BQ9H7P6 319 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 NMNAT1Q9HAN9 279 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 GIMAP4Q9NUV9 329 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 MAPRE3Q9UPY8 281 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 CTDSP2O14595 271 aa13.78□□□□□ -0.2
TRAFD1-201ENST00000257604 GUCY1B2O75343 617 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms