RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TGIF2Q9GZN2 237 aa8.83□□□□□ -1
NIP7-202ENST00000254941 VCX3BQ9H321 246 aa8.83□□□□□ -1
NIP7-202ENST00000254941 NECTIN3Q9NQS3 549 aa8.83□□□□□ -1
NIP7-202ENST00000254941 FBXO8Q9NRD0 319 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SLC22A11Q9NSA0 550 aa8.83□□□□□ -1
NIP7-202ENST00000254941 ADPRHL2Q9NX46 363 aa8.83□□□□□ -1
NIP7-202ENST00000254941 NCDNQ9UBB6 729 aa8.83□□□□□ -1
NIP7-202ENST00000254941 M0QX08 132 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SUV39H1O43463 412 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SLC28A2O43868 658 aa8.83□□□□□ -1
NIP7-202ENST00000254941 PEX1O43933 1283 aa8.83□□□□□ -1
NIP7-202ENST00000254941 NME6O75414 186 aaPredicted RBP8.83□□□□□ -1
NIP7-202ENST00000254941 CBX7O95931 251 aa8.83□□□□□ -1
NIP7-202ENST00000254941 AGR2O95994 175 aa8.83□□□□□ -1
NIP7-202ENST00000254941 MT-ND1P03886 318 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SEMG1P04279 462 aa8.83□□□□□ -1
NIP7-202ENST00000254941 NR2F1P10589 423 aa8.83□□□□□ -1
NIP7-202ENST00000254941 NBL1P41271 181 aa8.83□□□□□ -1
NIP7-202ENST00000254941 MAP3K8P41279 467 aa8.83□□□□□ -1
NIP7-202ENST00000254941 CRISP3P54108 245 aa8.83□□□□□ -1
NIP7-202ENST00000254941 RHAGQ02094 409 aa8.83□□□□□ -1
NIP7-202ENST00000254941 FUT5Q11128 374 aa8.83□□□□□ -1
NIP7-202ENST00000254941 ATP6AP1Q15904 470 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SYPL1Q16563 259 aa8.83□□□□□ -1
NIP7-202ENST00000254941 LRRC36Q1X8D7 754 aa8.83□□□□□ -1
NIP7-202ENST00000254941 NKAIN1Q4KMZ8 207 aa8.83□□□□□ -1
NIP7-202ENST00000254941 PRAMEF8Q5VWM4 474 aa8.83□□□□□ -1
NIP7-202ENST00000254941 PRAMEF7Q5VXH5 474 aa8.83□□□□□ -1
NIP7-202ENST00000254941 ZNF385CQ66K41 422 aaPredicted RBP8.83□□□□□ -1
NIP7-202ENST00000254941 VTCN1Q7Z7D3 282 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SLC44A2Q8IWA5 706 aaPredicted RBP8.83□□□□□ -1
NIP7-202ENST00000254941 ADAMTS15Q8TE58 950 aa8.83□□□□□ -1
NIP7-202ENST00000254941 CLIP3Q96DZ5 547 aa8.83□□□□□ -1
NIP7-202ENST00000254941 OTUB1Q96FW1 271 aaPredicted RBP8.83□□□□□ -1
NIP7-202ENST00000254941 CENPNQ96H22 339 aaPredicted RBP8.83□□□□□ -1
NIP7-202ENST00000254941 TACO1Q9BSH4 297 aaKnown RBP8.83□□□□□ -1
NIP7-202ENST00000254941 DOHHQ9BU89 302 aa8.83□□□□□ -1
NIP7-202ENST00000254941 KLHL4Q9C0H6 718 aa8.83□□□□□ -1
NIP7-202ENST00000254941 IRF2BPLQ9H1B7 796 aa8.83□□□□□ -1
NIP7-202ENST00000254941 SEMA6AQ9H2E6 1030 aa8.83□□□□□ -1
NIP7-202ENST00000254941 BCL2L10Q9HD36 194 aa8.83□□□□□ -1
NIP7-202ENST00000254941 ADAP2Q9NPF8 381 aa8.83□□□□□ -1
NIP7-202ENST00000254941 IL1RAPQ9NPH3 570 aa8.83□□□□□ -1
NIP7-202ENST00000254941 LIPT1Q9Y234 373 aa8.83□□□□□ -1
NIP7-202ENST00000254941 KCNE3Q9Y6H6 103 aa8.83□□□□□ -1
NIP7-202ENST00000254941 CLOCKO15516 846 aa8.82□□□□□ -1
NIP7-202ENST00000254941 GDF9O60383 454 aa8.82□□□□□ -1
NIP7-202ENST00000254941 COQ9O75208 318 aa8.82□□□□□ -1
NIP7-202ENST00000254941 DEAF1O75398 565 aaPredicted RBP8.82□□□□□ -1
NIP7-202ENST00000254941 RFPL3O75679 317 aa8.82□□□□□ -1
NIP7-202ENST00000254941 PDE9AO76083 593 aa8.82□□□□□ -1
NIP7-202ENST00000254941 PRSS23O95084 383 aa8.82□□□□□ -1
NIP7-202ENST00000254941 MFN2O95140 757 aa8.82□□□□□ -1
NIP7-202ENST00000254941 LDLRP01130 860 aa8.82□□□□□ -1
NIP7-202ENST00000254941 ETS2P15036 469 aa8.82□□□□□ -1
NIP7-202ENST00000254941 EFNA3P52797 238 aa8.82□□□□□ -1
NIP7-202ENST00000254941 KCNJ10P78508 379 aa8.82□□□□□ -1
NIP7-202ENST00000254941 DCDP81605 110 aaKnown RBP8.82□□□□□ -1
NIP7-202ENST00000254941 FUT7Q11130 342 aa8.82□□□□□ -1
NIP7-202ENST00000254941 EXOSC7Q15024 291 aaKnown RBP8.82□□□□□ -1
NIP7-202ENST00000254941 MINDY4Q4G0A6 757 aa8.82□□□□□ -1
NIP7-202ENST00000254941 RPS26P11Q5JNZ5 115 aaPredicted RBP8.82□□□□□ -1
NIP7-202ENST00000254941 ATAD3BQ5T9A4 648 aa8.82□□□□□ -1
NIP7-202ENST00000254941 HEPHL1Q6MZM0 1159 aa8.82□□□□□ -1
NIP7-202ENST00000254941 FKBP9P1Q75LS8 142 aa8.82□□□□□ -1
NIP7-202ENST00000254941 WDR53Q7Z5U6 358 aaPredicted RBP8.82□□□□□ -1
NIP7-202ENST00000254941 ANKFN1Q8N957 763 aa8.82□□□□□ -1
NIP7-202ENST00000254941 CDRT4Q8N9R6 151 aa8.82□□□□□ -1
NIP7-202ENST00000254941 CATSPER1Q8NEC5 780 aa8.82□□□□□ -1
NIP7-202ENST00000254941 DOK4Q8TEW6 326 aa8.82□□□□□ -1
NIP7-202ENST00000254941 LZICQ8WZA0 190 aa8.82□□□□□ -1
NIP7-202ENST00000254941 HOXB13Q92826 284 aaPredicted RBP8.82□□□□□ -1
NIP7-202ENST00000254941 SLC35A4Q96G79 324 aa8.82□□□□□ -1
NIP7-202ENST00000254941 TPD52L3Q96J77 140 aa8.82□□□□□ -1
NIP7-202ENST00000254941 HSH2DQ96JZ2 352 aa8.82□□□□□ -1
NIP7-202ENST00000254941 TRNT1Q96Q11 434 aaKnown RBP8.82□□□□□ -1
NIP7-202ENST00000254941 ZNF607Q96SK3 696 aa8.82□□□□□ -1
NIP7-202ENST00000254941 CMKLR1Q99788 373 aa8.82□□□□□ -1
NIP7-202ENST00000254941 CTRCQ99895 268 aa8.82□□□□□ -1
NIP7-202ENST00000254941 BDH2Q9BUT1 245 aa8.82□□□□□ -1
NIP7-202ENST00000254941 PIGUQ9H490 435 aa8.82□□□□□ -1
NIP7-202ENST00000254941 RUBCNLQ9H714 662 aa8.82□□□□□ -1
NIP7-202ENST00000254941 DUSP22Q9NRW4 184 aa8.82□□□□□ -1
NIP7-202ENST00000254941 EXD2Q9NVH0 621 aa8.82□□□□□ -1
NIP7-202ENST00000254941 GIN1Q9NXP7 522 aa8.82□□□□□ -1
NIP7-202ENST00000254941 CTSFQ9UBX1 484 aa8.82□□□□□ -1
NIP7-202ENST00000254941 PCDHGA1Q9Y5H4 931 aa8.82□□□□□ -1
NIP7-202ENST00000254941 CNOT1A5YKK6 2376 aaKnown RBP8.82□□□□□ -1
NIP7-202ENST00000254941 A0A0G2JPF8 293 aa8.81□□□□□ -1
NIP7-202ENST00000254941 TCRBV16S1A1N1A0A5B0 115 aa8.81□□□□□ -1
NIP7-202ENST00000254941 FAM149AA5PLN7 773 aa8.81□□□□□ -1
NIP7-202ENST00000254941 SYNDIG1LA6NDD5 238 aa8.81□□□□□ -1
NIP7-202ENST00000254941 HNRNPCL2B2RXH8 293 aa8.81□□□□□ -1
NIP7-202ENST00000254941 B4E171 279 aa8.81□□□□□ -1
NIP7-202ENST00000254941 HNRNPCL3B7ZW38 293 aa8.81□□□□□ -1
NIP7-202ENST00000254941 FOXD2O60548 495 aaPredicted RBP8.81□□□□□ -1
NIP7-202ENST00000254941 CPNE3O75131 537 aaKnown RBP8.81□□□□□ -1
NIP7-202ENST00000254941 SOX30O94993 753 aa8.81□□□□□ -1
NIP7-202ENST00000254941 RECKO95980 971 aa8.81□□□□□ -1
NIP7-202ENST00000254941 OPN1SWP03999 348 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms