RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 HNRNPA1P09651 372 aaKnown RBP eCLIP17.89■□□□□ 0.45
SNX4-201ENST00000251775 ARAFP10398 606 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 ARSBP15848 533 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 XKP51811 444 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 TAS2R50P59544 299 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 ABATP80404 500 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 MAB21L1Q13394 359 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 HEPACAMQ14CZ8 416 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 FNDC3BQ53EP0 1204 aaKnown RBP17.89■□□□□ 0.45
SNX4-201ENST00000251775 TOR2AQ5JU69 321 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 FAM71E1Q6IPT2 247 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 FAM83HQ6ZRV2 1179 aaPredicted RBP17.89■□□□□ 0.45
SNX4-201ENST00000251775 SFTPA1Q8IWL2 248 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 C2orf73Q8N5S3 287 aaPredicted RBP17.89■□□□□ 0.45
SNX4-201ENST00000251775 TMEM145Q8NBT3 493 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 OR4M2Q8NGB6 313 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 AP3S1Q92572 193 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 ZNF707Q96C28 371 aaPredicted RBP17.89■□□□□ 0.45
SNX4-201ENST00000251775 ZDHHC5Q9C0B5 715 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 GALNT9Q9HCQ5 603 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 PLAGL1Q9UM63 463 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 DIMT1Q9UNQ2 313 aaKnown RBP17.89■□□□□ 0.45
SNX4-201ENST00000251775 PRKAB1Q9Y478 270 aa17.89■□□□□ 0.45
SNX4-201ENST00000251775 LZTS3O60299 673 aaPredicted RBP17.88■□□□□ 0.45
SNX4-201ENST00000251775 GPR37L1O60883 481 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 SEMA7AO75326 666 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 PRKAR1AP10644 381 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 GSTM5P46439 218 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 OCLNQ16625 522 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 PLK5Q496M5 336 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 HIST2H2AA3Q6FI13 130 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 ETFBKMTQ8IXQ9 262 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 APOBEC4Q8WW27 367 aaKnown RBP17.88■□□□□ 0.45
SNX4-201ENST00000251775 GFM1Q96RP9 751 aaKnown RBP17.88■□□□□ 0.45
SNX4-201ENST00000251775 SORBS1Q9BX66 1292 aaKnown RBP17.88■□□□□ 0.45
SNX4-201ENST00000251775 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNX4-201ENST00000251775 MYNNQ9NPC7 610 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 SF3B6Q9Y3B4 125 aaKnown RBP17.88■□□□□ 0.45
SNX4-201ENST00000251775 PCDHGB7Q9Y5F8 929 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 NUP210Q8TEM1 1887 aaPredicted RBP17.88■□□□□ 0.45
SNX4-201ENST00000251775 OTOL1A6NHN0 477 aaPredicted RBP17.88■□□□□ 0.45
SNX4-201ENST00000251775 ADRB3P13945 408 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 MAPK12P53778 367 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 PPP3R1P63098 170 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNX4-201ENST00000251775 MMP21Q8N119 569 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 C9orf62Q8N4C0 152 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 TM9SF4Q92544 642 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 C1GALT1C1Q96EU7 318 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 LINC00615Q96LM1 132 aaPredicted RBP17.88■□□□□ 0.45
SNX4-201ENST00000251775 NRTNQ99748 197 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 ANGPT4Q9Y264 503 aa17.88■□□□□ 0.45
SNX4-201ENST00000251775 NINQ8N4C6 2090 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 MUC22E2RYF6 1773 aaPredicted RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 PLOD3O60568 738 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 HPGDSO60760 199 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 SLC43A1O75387 559 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 ADH1CP00326 375 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 ELAVL4P26378 380 aaKnown RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 CHI3L1P36222 383 aaPredicted RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 HNRNPA1L2Q32P51 320 aaKnown RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 ZNF765Q7L2R6 523 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 C11orf96Q7Z7L8 435 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 LAPTM4BQ86VI4 370 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 IQCF1Q8N6M8 205 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 TMIEQ8NEW7 156 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 SP7Q8TDD2 431 aaPredicted RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 OR8D1Q8WZ84 308 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 TESQ9UGI8 421 aaKnown RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 MGAT4BQ9UQ53 548 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 KIF26AQ9ULI4 1882 aaPredicted RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 LOC102723532A0A0G2JNH3 316 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 C17orf113A0A1B0GUU1 675 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 PRKYO43930 277 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 OR10H3O60404 316 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 RAB36O95755 333 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 CRTC2Q53ET0 693 aaPredicted RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 SDE2Q6IQ49 451 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 FAM92BQ6ZTR7 304 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 TMEM163Q8TC26 289 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 TM9SF2Q99805 663 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 TMEM43Q9BTV4 400 aa17.87■□□□□ 0.45
SNX4-201ENST00000251775 RSPO3Q9BXY4 272 aaPredicted RBP17.87■□□□□ 0.45
SNX4-201ENST00000251775 STK25O00506 426 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 TLX2O43763 284 aaPredicted RBP17.86■□□□□ 0.45
SNX4-201ENST00000251775 IL3P08700 152 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 GAB4Q2WGN9 574 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 OR2G6Q5TZ20 316 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 FAM180BQ6P0A1 224 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 QSOX2Q6ZRP7 698 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 OR5AR1Q8NGP9 310 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 OR2L2Q8NH16 312 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 MARVELD3Q96A59 401 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 DCLRE1CQ96SD1 692 aaKnown RBP17.86■□□□□ 0.45
SNX4-201ENST00000251775 KCNJ15Q99712 375 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 TVP23BQ9NYZ1 205 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 ANTXRLA6NF34 631 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 ORC5O43913 435 aa17.86■□□□□ 0.45
SNX4-201ENST00000251775 TP53P04637 393 aaPredicted RBP17.86■□□□□ 0.45
SNX4-201ENST00000251775 DPTQ07507 201 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms