RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MFSD12Q6NUT3 480 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 DHFR2Q86XF0 187 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 TMEM151BQ8IW70 566 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 AQP12AQ8IXF9 295 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 EID3Q8N140 333 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 ADCY4Q8NFM4 1077 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 OR5AK3PQ8NH89 298 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 PTPMT1Q8WUK0 201 aaPredicted RBP12.07□□□□□ -0.48
LSM8-201ENST00000249299 KAT2AQ92830 837 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 PMEPA1Q969W9 287 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 GIMAP5Q96F15 307 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 SENP5Q96HI0 755 aaPredicted RBP12.07□□□□□ -0.48
LSM8-201ENST00000249299 CALML5Q9NZT1 146 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 PCDHGA6Q9Y5G7 932 aa12.07□□□□□ -0.48
LSM8-201ENST00000249299 SCN3AQ9NY46 2000 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 C17orf105B2RV13 164 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 CNOT3O75175 753 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 IGKV3-11P04433 115 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 ARAFP10398 606 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 TNNI3P19429 210 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 GGT1P19440 569 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 FOLR3P41439 243 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 STAT5AP42229 794 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 CLDN6P56747 220 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 OR4D2P58180 307 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 EEF1A2Q05639 463 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 FLOT2Q14254 428 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 SSPNQ14714 243 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 LASP1Q14847 261 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 ZNHIT3Q15649 155 aaPredicted RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 TRMT12Q53H54 448 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 ATAD3BQ5T9A4 648 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 IRAK1BP1Q5VVH5 260 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 LCN10Q6JVE6 187 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 FAM111BQ6SJ93 734 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 ANGPTL8Q6UXH0 198 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 CCDC80Q76M96 950 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 TIPARPQ7Z3E1 657 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 ANKRD37Q7Z713 158 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 PTOV1Q86YD1 416 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 ZZZ3Q8IYH5 903 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 SHISA5Q8N114 240 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 ZNF615Q8N8J6 731 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 HIPK4Q8NE63 616 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 C17orf47Q8NEP4 570 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 OR8K3Q8NH51 312 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 ADAMTS15Q8TE58 950 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 OIT3Q8WWZ8 545 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 TSLPQ969D9 159 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 PPWD1Q96BP3 646 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 CCDC124Q96CT7 223 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 RNF145Q96MT1 663 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 LPAR4Q99677 370 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 LMF2Q9BU23 707 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 EFHD1Q9BUP0 239 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 PRR14Q9BWN1 585 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 PIGUQ9H490 435 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 DENND2DQ9H6A0 471 aaPredicted RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 POLE3Q9NRF9 147 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 THSD1Q9NS62 852 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 EXD2Q9NVH0 621 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 FOXJ2Q9P0K8 574 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 P2RX2Q9UBL9 471 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 KCND3Q9UK17 655 aa12.06□□□□□ -0.48
LSM8-201ENST00000249299 FARSAQ9Y285 508 aaKnown RBP12.06□□□□□ -0.48
LSM8-201ENST00000249299 CNOT1A5YKK6 2376 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 SAGE2PA6NJ88 616 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 ANKRD65E5RJM6 399 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 AGRPO00253 132 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 HMGN4O00479 90 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 TERTO14746 1132 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 GSTA4O15217 222 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 RAD1O60671 282 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 PDE9AO76083 593 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 NKX2-2O95096 273 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 IFNA14P01570 189 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 TFPTP0C1Z6 253 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 CT62P0C5K7 136 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 UMPSP11172 480 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 ETFAP13804 333 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 MMP11P24347 488 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 EMDP50402 254 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 PRKAG1P54619 331 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 POLE2P56282 527 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 MRPS35P82673 323 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 MS4A2Q01362 244 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 GUCA2AQ02747 115 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 RIPK1Q13546 671 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 ZNF267Q14586 743 aaPredicted RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 MYBPC3Q14896 1274 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 COX20Q5RI15 118 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 GLYATQ6IB77 296 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 HEPHL1Q6MZM0 1159 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 REEP3Q6NUK4 255 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 ZFP1Q6P2D0 407 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 CPEB2Q7Z5Q1 589 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 PATL1Q86TB9 770 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 IFNEQ86WN2 208 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 DTX1Q86Y01 620 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 HORMAD2Q8N7B1 307 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms