RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 RFXAPO00287 272 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 SCAMP1O15126 338 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 ERAL1O75616 437 aaKnown RBP20.63■□□□□ 0.89
RNF39-201ENST00000244360 SNRNP200O75643 2136 aaKnown RBP20.63■□□□□ 0.89
RNF39-201ENST00000244360 CHRM4P08173 479 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 NDUFS1P28331 727 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 KCNJ8Q15842 424 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 LEXMQ3ZCV2 418 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 CCDC190Q86UF4 302 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 AMIGO1Q86WK6 493 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 PAQR7Q86WK9 346 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 DNAJC5GQ8N7S2 189 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 OR1E3Q8WZA6 343 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 RNF167Q9H6Y7 350 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 ENTPD4Q9Y227 616 aa20.63■□□□□ 0.89
RNF39-201ENST00000244360 POM121BA6NF01 834 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 KCNK2O95069 426 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 EPPINO95925 133 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 FHP07954 510 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 GTF2E2P29084 291 aaKnown RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 HOXD12P35452 270 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 STXBP1P61764 594 aaKnown RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 GNA13Q14344 377 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 TMEM201Q5SNT2 666 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 C18orf63Q68DL7 685 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 C12orf73Q69YU5 71 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 CYP4Z2PQ8N1L4 340 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 SLC7A13Q8TCU3 470 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 CEP19Q96LK0 163 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 OR5M11Q96RB7 305 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 TWSG1Q9GZX9 223 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 SIAEQ9HAT2 523 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 KCNK12Q9HB15 430 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 SLC25A19Q9HC21 320 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 REV3LO60673 3130 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 TLR4O00206 839 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 PROM1O43490 865 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 OR10H3O60404 316 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 UGT2B17O75795 530 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 KLF8O95600 359 aaPredicted RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 EML2O95834 649 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 HMGN2P05204 90 aaKnown RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 CSNK2A2P19784 350 aaPredicted RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 ZNF750Q32MQ0 723 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 SOWAHCQ53LP3 525 aaPredicted RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 USP30Q70CQ3 517 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 LCN9Q8WX39 176 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 JPH3Q8WXH2 748 aaPredicted RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 TMEM165Q9HC07 324 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 MOV10Q9HCE1 1003 aaKnown RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 LYARQ9NX58 379 aaKnown RBP20.62■□□□□ 0.89
RNF39-201ENST00000244360 CLEC1BQ9P126 229 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 FBXW2Q9UKT8 454 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 PCOLCE2Q9UKZ9 415 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 KLHL20Q9Y2M5 609 aa20.62■□□□□ 0.89
RNF39-201ENST00000244360 ATG2BQ96BY7 2078 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 M0R3H8 397 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 ARHGAP33O14559 1287 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 SCG5P05408 212 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 ASGR2P07307 311 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 POU1F1P28069 291 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 CSTF2P33240 577 aaKnown RBP eCLIP20.61■□□□□ 0.89
RNF39-201ENST00000244360 PCYT1AP49585 367 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 FOXD4Q12950 439 aaPredicted RBP20.61■□□□□ 0.89
RNF39-201ENST00000244360 NFATC4Q14934 902 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 CD300LDQ6UXZ3 194 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 CCDC116Q8IYX3 515 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 GALNT6Q8NCL4 622 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 ZNF681Q96N22 645 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 TRAPPC4Q9Y296 219 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 SLC9A8Q9Y2E8 581 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 A0A0G2JPF8 293 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 ISM1B1AKI9 464 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 HNRNPCL2B2RXH8 293 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 HNRNPCL3B7ZW38 293 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 DYRK3O43781 588 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 LGI1O95970 557 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 EGFP01133 1207 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 HNRNPCL4P0DMR1 293 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 ENDOUP21128 410 aaKnown RBP20.61■□□□□ 0.89
RNF39-201ENST00000244360 CTHP32929 405 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 CLDN2P57739 230 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 RAB8AP61006 207 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 LASP1Q14847 261 aaKnown RBP20.61■□□□□ 0.89
RNF39-201ENST00000244360 DESI1Q6ICB0 168 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 TMEM53Q6P2H8 277 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 VN1R4Q7Z5H5 301 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 ROGDIQ9GZN7 287 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 MAN2C1Q9NTJ4 1040 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 TAS2R16Q9NYV7 291 aa20.61■□□□□ 0.89
RNF39-201ENST00000244360 CASC3O15234 703 aaKnown RBP20.6■□□□□ 0.89
RNF39-201ENST00000244360 TP53P04637 393 aaPredicted RBP20.6■□□□□ 0.89
RNF39-201ENST00000244360 ADRA2AP08913 450 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 PTGER1P34995 402 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 PRKAG1P54619 331 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 ALDH6A1Q02252 535 aaKnown RBP20.6■□□□□ 0.89
RNF39-201ENST00000244360 TGM3Q08188 693 aa20.6■□□□□ 0.89
RNF39-201ENST00000244360 PIN1Q13526 163 aaPredicted RBP20.6■□□□□ 0.89
RNF39-201ENST00000244360 CCDC92Q53HC0 331 aaPredicted RBP20.6■□□□□ 0.89
RNF39-201ENST00000244360 TJAP1Q5JTD0 557 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms