RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 RNF6Q9Y252 685 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 FIS1Q9Y3D6 152 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 PTGDR2Q9Y5Y4 395 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 CRYBG3Q68DQ2 2970 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 ANKRD33BA6NCL7 494 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 C2orf72A6NCS6 295 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 FIGNL2A6NMB9 653 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 GNB5O14775 395 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 HCN1O60741 890 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 PPM1BO75688 479 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 TRAPPC6AO75865 159 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 ABCB1P08183 1280 aaPredicted RBP13.04□□□□□ -0.32
GPN3-201ENST00000228827 UROSP10746 265 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 CASP3P42574 277 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 EMDP50402 254 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 RPP38P78345 283 aaKnown RBP13.04□□□□□ -0.32
GPN3-201ENST00000228827 IFFO1Q0D2I5 559 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 ZNF763Q0D2J5 394 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 WLSQ5T9L3 541 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 GALNT18Q6P9A2 607 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 PACS2Q86VP3 889 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 OR10Q1Q8NGQ4 319 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 NEIL3Q8TAT5 605 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 HSPBAP1Q96EW2 488 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 C11orf24Q96F05 449 aaPredicted RBP13.04□□□□□ -0.32
GPN3-201ENST00000228827 GNRHR2Q96P88 292 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 SECISBP2Q96T21 854 aaKnown RBP13.04□□□□□ -0.32
GPN3-201ENST00000228827 UCK2Q9BZX2 261 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 IQCGQ9H095 443 aaKnown RBP13.04□□□□□ -0.32
GPN3-201ENST00000228827 SENP1Q9P0U3 644 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.04□□□□□ -0.32
GPN3-201ENST00000228827 MID2Q9UJV3 735 aa13.04□□□□□ -0.32
GPN3-201ENST00000228827 V9GYY5 206 aaPredicted RBP13.04□□□□□ -0.32
GPN3-201ENST00000228827 DIDO1Q9BTC0 2240 aaKnown RBP13.03□□□□□ -0.32
GPN3-201ENST00000228827 C15orf38-AP3S2A0A0A6YYH1 394 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 NKX2-6A6NCS4 301 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 SPAG7O75391 227 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 DDCP20711 480 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 PPICP45877 212 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 PCLAFQ15004 111 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 TOMM20Q15388 145 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 ERCC6LQ2NKX8 1250 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 RTL6Q6ICC9 239 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 B3GNT6Q6ZMB0 384 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 ACAD11Q709F0 780 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 TRIM46Q7Z4K8 759 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 SAMD14Q8IZD0 417 aaPredicted RBP13.03□□□□□ -0.32
GPN3-201ENST00000228827 FAM9CQ8IZT9 166 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 ZNF675Q8TD23 568 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 ASB5Q8WWX0 329 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 HGDQ93099 445 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 APOPT1Q96IL0 206 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 NODALQ96S42 347 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 TTYH2Q9BSA4 534 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 GATA5Q9BWX5 397 aaPredicted RBP13.03□□□□□ -0.32
GPN3-201ENST00000228827 GALNT9Q9HCQ5 603 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 RRAGDQ9NQL2 400 aaPredicted RBP13.03□□□□□ -0.32
GPN3-201ENST00000228827 FAM215AQ9Y5M1 114 aa13.03□□□□□ -0.32
GPN3-201ENST00000228827 FRG2CA6NGY1 282 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 H3BQF6 201 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 ACOX3O15254 700 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 UGT2B11O75310 529 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 RSL1D1O76021 490 aaKnown RBP13.02□□□□□ -0.33
GPN3-201ENST00000228827 SNX4O95219 450 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.33
GPN3-201ENST00000228827 NUDT17P0C025 328 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 GLI4P10075 376 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 DRD5P21918 477 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 CHRNB4P30926 498 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 MPIP34949 423 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 PTGER4P35408 488 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 NCBP2P52298 156 aaKnown RBP eCLIP13.02□□□□□ -0.33
GPN3-201ENST00000228827 CORO7P57737 925 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 DCAF7P61962 342 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 C1orf185Q5T7R7 199 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 FNDC7Q5VTL7 733 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 FAM71E1Q6IPT2 247 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 NOXRED1Q6NXP6 359 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 MYO7BQ6PIF6 2116 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 ANGPTL8Q6UXH0 198 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 NUP54Q7Z3B4 507 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 GDF7Q7Z4P5 450 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 TRABD2AQ86V40 505 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 BANPQ8N9N5 519 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 OR7G2Q8NG99 324 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 TMBIM1Q969X1 311 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 FAM111AQ96PZ2 611 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 MECRQ9BV79 373 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 ACKR4Q9NPB9 350 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 MIEF1Q9NQG6 463 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 SIRT5Q9NXA8 310 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 QPCTLQ9NXS2 382 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 KLRF1Q9NZS2 232 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 SLC17A7Q9P2U7 560 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 C15orf41Q9Y2V0 281 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 SLC6A5Q9Y345 797 aa13.02□□□□□ -0.33
GPN3-201ENST00000228827 AZIN1O14977 448 aa13.01□□□□□ -0.33
GPN3-201ENST00000228827 TRIM13O60858 407 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms