RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MAGED4Q96JG8 741 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 NPIPA1Q9UND3 350 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 NPFFR2Q9Y5X5 522 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 UBR5O95071 2799 aaPredicted RBP11.69□□□□□ -0.54
LSM5-201ENST00000223084 GTF3C1Q12789 2109 aa11.69□□□□□ -0.54
LSM5-201ENST00000223084 EXPH5Q8NEV8 1989 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 DNAJC13O75165 2243 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 ZNF407Q9C0G0 2248 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 RELNP78509 3460 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 KLRC4-KLRK1H3BQV0 150 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 SCAMP2O15127 329 aaKnown RBP11.68□□□□□ -0.54
LSM5-201ENST00000223084 PDPK1O15530 556 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 ZNHIT1O43257 154 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 PLOD3O60568 738 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 TBX19O60806 448 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 G6PDP11413 515 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 PRPS2P11908 318 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 CNR1P21554 472 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 PIGAP37287 484 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 DNASE1L1P49184 302 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 CORO7P57737 925 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 FBXW4P57775 412 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 OCRLQ01968 901 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 EMX2Q04743 252 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 HSPB3Q12988 150 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 ELOAQ14241 798 aaKnown RBP11.68□□□□□ -0.54
LSM5-201ENST00000223084 PRAMEF20Q5VT98 475 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 SLC22A10Q63ZE4 541 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 DESI1Q6ICB0 168 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 SIAH3Q8IW03 269 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 TRIM42Q8IWZ5 723 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 GOLM1Q8NBJ4 401 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 OR2M7Q8NG81 312 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 ELP4Q96EB1 424 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 LCORQ96JN0 433 aaPredicted RBP11.68□□□□□ -0.54
LSM5-201ENST00000223084 SGCZQ96LD1 299 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 MEAF6Q9HAF1 191 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 FOLH1BQ9HBA9 442 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 SH2D2AQ9NP31 389 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 SACM1LQ9NTJ5 587 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 ZNF446Q9NWS9 450 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 PRODH2Q9UF12 536 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 ATP6V1HQ9UI12 483 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 EIF3LQ9Y262 564 aaKnown RBP11.68□□□□□ -0.54
LSM5-201ENST00000223084 CFL2Q9Y281 166 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 MYO7BQ6PIF6 2116 aa11.68□□□□□ -0.54
LSM5-201ENST00000223084 DOPEY2Q9Y3R5 2298 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 FLNCQ14315 2725 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 DIDO1Q9BTC0 2240 aaKnown RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 GOLGA8QA0A0J9YX86 632 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 GOLGA8OA6NCC3 632 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 GOLGA8NF8WBI6 632 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 UPK1AO00322 258 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 SDHDO14521 159 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 BCAS2O75934 225 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 UNC5CO95185 931 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 P04436 131 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 LAMP1P11279 417 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 ZNF24P17028 368 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 ABCD3P28288 659 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 HPCAL1P37235 193 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 CDK9P50750 372 aaKnown RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 DIO3P55073 304 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 MANFP55145 182 aaKnown RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 NRG3P56975 720 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 ZNF155Q12901 538 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 NTRK2Q16620 822 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 BICRALQ6AI39 1079 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 GFRALQ6UXV0 394 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 FAM47EQ6ZV65 393 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 R3HCC1LQ7Z5L2 792 aaKnown RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 WDR53Q7Z5U6 358 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 WDR75Q8IWA0 830 aaKnown RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 C17orf47Q8NEP4 570 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 RAB3IL1Q8TBN0 382 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 PAQR8Q8TEZ7 354 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 ERP27Q96DN0 273 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 OMA1Q96E52 524 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 ZNF764Q96H86 408 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 WDR55Q9H6Y2 383 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 PROK2Q9HC23 129 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 NOP53Q9NZM5 478 aaKnown RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 SEC14L3Q9UDX4 400 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 C19orf53Q9UNZ5 99 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 OSGIN2Q9Y236 505 aa11.67□□□□□ -0.54
LSM5-201ENST00000223084 GPR55Q9Y2T6 319 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 CHCHD2Q9Y6H1 151 aaPredicted RBP11.67□□□□□ -0.54
LSM5-201ENST00000223084 FREM3P0C091 2139 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 A0A087WV62 115 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 FRG2CA6NGY1 282 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 FAM166BA8MTA8 275 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 PLOD2O00469 737 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 KLF11O14901 512 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 TFECO14948 347 aaPredicted RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 HDAC3O15379 428 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 HS6ST1O60243 411 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 SEMA7AO75326 666 aa11.66□□□□□ -0.54
LSM5-201ENST00000223084 ERN1O75460 977 aaKnown RBP11.66□□□□□ -0.54
LSM5-201ENST00000223084 ABCB1P08183 1280 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms