RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 FBXW2Q9UKT8 454 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SSC5DA1L4H1 1573 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 STRCQ7RTU9 1775 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ADAM23O75077 832 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 NDUFV2P19404 249 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 PRSS3P35030 304 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ARHGAP1Q07960 439 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SNTB1Q13884 538 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ITPRIPL2Q3MIP1 535 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM214Q6NUQ4 689 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CIR1Q86X95 450 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 OR14C36Q8NHC7 312 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LRRN4Q8WUT4 740 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SORCS1Q8WY21 1168 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ARL6Q9H0F7 186 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 AKTIPQ9H8T0 292 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CHRAC1Q9NRG0 131 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TVP23BQ9NYZ1 205 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 MYOTQ9UBF9 498 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 PRDM4Q9UKN5 801 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ENTPD2Q9Y5L3 495 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 EMC8O43402 210 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 GMDSO60547 372 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LGR5O75473 907 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 NELFEP18615 380 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TAS2R19P59542 299 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SELPLGQ14242 412 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 GRM2Q14416 872 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CMC1Q7Z7K0 106 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CHDHQ8NE62 594 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 OR10R2Q8NGX6 335 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF461Q8TAF7 563 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 C3orf49Q96BT1 292 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 GAL3ST4Q96RP7 486 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF416Q9BWM5 594 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 RNF208Q9H0X6 261 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 GPATCH2LQ9NWQ4 482 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 UGT2A1Q9Y4X1 527 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LOC102723532A0A0G2JNH3 316 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 C13orf42A0A1B0GVH6 325 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 PCP4L1A6NKN8 68 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 KCNQ2O43526 872 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 IL1AP01583 271 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ETS2P15036 469 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CSF2RAP15509 400 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 RFC3P40938 356 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LUMP51884 338 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 WNT4P56705 351 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ANKK1Q8NFD2 765 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 PCED1BQ96HM7 432 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 RASD1Q9Y272 281 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TRBV2A0A0J9YWF9 115 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TBPP20226 339 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 AZGP1P25311 298 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CAMLGP49069 296 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 BMXP51813 675 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 DCAF7P61962 342 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 DEFA6Q01524 100 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 RBMS2Q15434 407 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM220Q6QAJ8 160 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 MISPQ8IVT2 679 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LNX2Q8N448 690 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 LINC00116Q8NCU8 138 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SIMC1Q8NDZ2 872 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 OR13J1Q8NGT2 312 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 FNDC9Q8TBE3 224 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SLC2A12Q8TD20 617 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CNTNAP3BQ96NU0 1288 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SORCS2Q96PQ0 1159 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 GPR174Q9BXC1 333 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 MUSKO15146 869 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 HEXBP07686 556 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF616Q08AN1 781 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 GALNT2Q10471 571 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 NICN1Q9BSH3 213 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 METTL7AQ9H8H3 244 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ABCB8Q9NUT2 735 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ZFR2Q9UPR6 939 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SLC22A14Q9Y267 594 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 BTAF1O14981 1849 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF780AO75290 641 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 OR8U9P0C7N5 309 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 MPC1LP0DKB6 136 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 KCNE1P15382 129 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 POU6F2P78424 691 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SLC7A9P82251 487 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CAP1Q01518 475 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 NTRK2Q16620 822 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 FAM83HQ6ZRV2 1179 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ZFAND4Q86XD8 727 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 OR13C3Q8NGS6 347 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.81□□□□□ -1.482e-6■■■■■ 35.6
VPS13D-201ENST00000011700 PGLYRP2Q96PD5 576 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 ANKRD60Q9BZ19 345 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 SLC38A1Q9H2H9 487 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 NLE1Q9NVX2 485 aaPredicted RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 C1orf123Q9NWV4 160 aa5.81□□□□□ -1.48
VPS13D-201ENST00000011700 NOCTQ9UK39 431 aaKnown RBP5.81□□□□□ -1.48
VPS13D-201ENST00000011700 CEPT1Q9Y6K0 416 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms