RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Znf628Q8CJ78 1038 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Defb35Q8R2I3 63 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr1387Q8VFA9 311 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Camk1gQ91VB2 477 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Atg13Q91YI1 516 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Phf6Q9D4J7 364 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gpr88Q9EPB7 384 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Uba2Q9Z1F9 638 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Cep290Q6A078 2472 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Mup18A2BIM8 181 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gm597E9Q8J5 896 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Sult3a2G5E904 293 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 5730507C01RikJ3QPX0 416 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gm10338K7N692 204 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Zfp934K7N6H3 473 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Chst3O88199 472 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Mup11P04938 181 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 GypaP14220 168 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Phxr1P15973 60 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Htr7P32304 448 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Mrps6P58064 125 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Rps25P62852 125 aaKnown RBP10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Polr2lP62876 67 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Bcl2a1cQ0P538 128 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Zc3hav1Q3UPF5 946 aaKnown RBP10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Arhgef9Q3UTH8 516 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gm21320Q4FZE8 181 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Orm1Q60590 207 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Rbbp4Q60972 425 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tmc6Q7TN60 810 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Arl15Q8BGR6 204 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Nup107Q8BH74 926 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Atp6v1hQ8BVE3 483 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 TtpaQ8BWP5 278 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Q8C0X8 640 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ugt2b37Q8VCN3 530 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 TapbplQ8VD31 451 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ogfrl1Q8VE52 464 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr1020Q8VFK7 317 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Fam3cQ91VU0 227 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tmem159Q922Z1 161 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tram2Q924Z5 370 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gpr146Q99LE2 333 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Cyp4f15Q99N18 534 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 3300002I08RikQ9CXH3 147 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Prkar1aQ9DBC7 381 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tnfrsf21Q9EPU5 655 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 HraslsQ9QZU4 167 aa10.98□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Igkv18-36A0A075B5M9 114 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tyw5A2RSX7 315 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gm14744B1AVU4 173 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gm20695H3BLK7 282 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr209L7N1X3 305 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 DdostO54734 441 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tcea1P10711 301 aaKnown RBP10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ppp2r1bQ7TNP2 601 aaKnown RBP10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr26Q7TRB7 308 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr845Q7TRG2 312 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Lamp3Q7TST5 411 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Bnc2Q8BMQ3 1127 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ppwd1Q8CEC6 646 aaKnown RBP10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Cdkl1Q8CEQ0 352 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 C1raQ8CG16 707 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Fam161aQ8QZV6 448 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Yaf2Q99LW6 179 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Rwdd2bQ99M03 290 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Trmt5Q9D0C4 501 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 5430402E10RikQ9D3N5 173 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Fam45aQ9D8N2 357 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Ebna1bp2Q9D903 306 aaKnown RBP10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr933Q9EQA0 308 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Vmn2r93L7N1Z9 857 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Hps1O08983 704 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Lsm2O35900 95 aaKnown RBP10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 P01675 107 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 P01676 107 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 P01677 107 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 P01678 107 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Nid1P10493 1245 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Hsf2P38533 535 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tmprss11cQ1JRP2 431 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Dennd1bQ3U1T9 766 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 OgnQ62000 298 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr1101Q7TR59 310 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Trim23Q8BGX0 574 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 GanabQ8BHN3 944 aaKnown RBP10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Arhgap22Q8BL80 702 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Znf786Q8BV42 777 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Sall4Q8BX22 1067 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 EndovQ8C9A2 338 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Gatad2aQ8CHY6 629 aaKnown RBP10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Vmn1r192Q8K4C9 300 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr478Q8VG04 314 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Olfr1052Q8VGR8 312 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Akr1c21Q91WR5 323 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Lims1Q99JW4 325 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Tmed9Q99KF1 235 aaKnown RBP10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 Spz1Q99MY0 378 aa10.97□□□□□ -0.65
Col9a1-202ENSMUST00000088349 FcmrA1KXC4 422 aa10.96□□□□□ -0.65
Col9a1-202ENSMUST00000088349 CerklA2AQH1 525 aa10.96□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms