RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Tusc2Q9WVF8 110 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm42372A0A1B0GT27 204 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Smim17A0A504 109 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Zfp963D3Z2T8 383 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Prrt2E9PUL5 346 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Klf6O08584 283 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 TekQ02858 1122 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Sppl2bQ3TD49 578 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Cdk15Q3V3A1 433 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Taar6Q5QD13 345 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Cntn4Q69Z26 1026 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Kcnk18Q6VV64 394 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 MroQ7TNB4 248 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Frat2Q8K025 231 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fbxw7Q8VBV4 629 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Cited4Q9WUL8 182 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm45800A0A1B0GT24 152 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr1215A3KGY3 312 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 A930018M24RikB7ZMY3 218 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Slc16a8O35308 492 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tulp3O88413 460 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Bmpr1aP36895 532 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Idh3gP70404 393 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Wnt10aP70701 417 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Nr1d2Q60674 576 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ugt1a1Q63886 535 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Neil2Q6R2P8 329 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mogat2Q80W94 334 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Slc41a2Q8BYR8 573 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Dedd2Q8QZV0 330 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 NcaldQ91X97 193 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Reep3Q99KK1 254 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Asf1aQ9CQE6 204 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fbxo25Q9D2Y6 357 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Slc19a2Q9EQN9 498 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Lpar2Q9JL06 348 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 A0A286YD17 136 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fndc10A2A9Q0 223 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 RnlsA7RDN6 342 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tas2r122D3YU55 309 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 4930467E23RikD3Z1P8 350 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm15319E9Q637 350 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Spaca6E9Q8Q8 339 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Sigmar1O55242 223 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 H3f3cP02301 136 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Crabp1P62965 137 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 H3f3aP84244 136 aaKnown RBP8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Epha4Q03137 986 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Qrich1Q3UA37 777 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tusc1Q673H1 205 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Zfp955aQ80XR7 545 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Cyp2d12Q8BVD2 504 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mbnl2Q8C181 373 aaKnown RBP8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm21119Q8C646 350 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 GcaQ8VC88 220 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr395Q8VGR3 312 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tfap2dQ91ZK0 452 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 GrapQ9CX99 217 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 AenQ9CZI9 336 aaKnown RBP8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Dynll2Q9D0M5 89 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 CabyrQ9D424 453 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 SlirpQ9D8T7 112 aaKnown RBP8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tlr1Q9EPQ1 795 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Myoz1Q9JK37 296 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ndufaf3Q9JKL4 185 aa8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Bag6Q9Z1R2 1154 aaKnown RBP8.55□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mup19A9C497 187 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Il4i1O09046 630 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mup6P02762 180 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mup1P11588 180 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mgat1P27808 447 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Sumo2P61957 95 aaKnown RBP8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Adam5Q3TTE0 751 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 ItgadQ3V0T4 1168 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Elmod1Q3V1U8 326 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 C2cd4cC2CD4Q5HZI2 419 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Sco1Q5SUC9 284 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Spata22Q5SV06 358 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 LipkQ8BM14 398 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Zbtb49Q8BXX2 756 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mboat7Q8CHK3 473 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rfc3Q8R323 356 aaKnown RBP8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Akr1c13Q8VC28 323 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Glb1lQ8VC60 646 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Pdzd3Q99MJ6 498 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 BC034090A0A087WP46 1202 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Vmn2r27D3YUK6 857 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ankrd29D3YVV3 309 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 TertO70372 1122 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Kir3dl1P83555 432 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gpat2Q14DK4 801 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Pak6Q3ULB5 682 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Btg1-ps1Q3V0S2 161 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Btg1-ps2Q3V0X0 161 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Clca4aQ6Q473 924 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr787Q7TRI1 312 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Orai2Q8BH10 250 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Abhd18Q8C1A9 464 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Zfp446Q8C9M8 523 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 CenpiQ8K1K4 746 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms