RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Synpo2lQ8BWB1 975 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Pih1h3bQ8C6P5 218 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Btbd9Q8C726 612 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Spats2Q8K1N4 545 aaKnown RBP10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Hsd17b13Q8VCR2 304 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 KptnQ8VCX6 430 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Olfr849Q8VFF6 312 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Pcdhga11Q91XY8 933 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Vmp1Q99KU0 406 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Rbm18Q9CR83 190 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Fbxl20Q9CZV8 436 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Mrpl45Q9D0Q7 306 aaKnown RBP10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Kti12Q9D1R2 351 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Haus5Q9D786 619 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Fam96aQ9DCL2 160 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Slc19a2Q9EQN9 498 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Prg4Q9JM99 1054 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Dkk3Q9QUN9 349 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Cyp11a1Q9QZ82 526 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 CtsjQ9R014 334 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Cldn8Q9Z260 225 aa10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Prr12E9PYL2 2035 aaKnown RBP10.56□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Olfr1076A2AK60 313 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Dlgap4B1AZP2 992 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Zfp964B2RR88 472 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Ptrhd1D3Z4S3 140 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Krt90E9Q1Z0 538 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Omt2aF6ZJR3 104 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Vmn2r38G3UYA8 861 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Vmn2r31L7N1Z4 861 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Vmn2r52L7N2B2 852 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Vmn2r44L7N2E1 861 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 H2-Q1O19441 368 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Emp3O35912 163 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Pip5k1cO70161 661 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Akap10O88845 662 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 P01667 111 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Tuba3aP05214 450 aaKnown RBP10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 ChrneP20782 493 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Ggta1P23336 394 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Ppm1bP36993 390 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Matn1P51942 500 aaKnown RBP10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Has2P70312 552 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Ext1P97464 746 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 BmxP97504 651 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Gbp8Q2V6D6 525 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Q32M26 199 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Tmem173Q3TBT3 378 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Mapkapk3Q3UMW7 384 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Hipk4Q3V016 616 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Wfdc5Q4KXB6 126 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Nrsn2Q5HZK2 202 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Krtcap2Q5RL79 136 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Arhgap44Q5SSM3 814 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Lefty1Q64280 368 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Lix1Q6P566 282 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Snx6Q6P8X1 406 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Ugt2a2Q6PDD0 528 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Ticam1Q80UF7 732 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Sdad1Q80UZ2 687 aaKnown RBP10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 SybuQ8BHS8 665 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Zcchc4Q8BKW4 512 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Bbs4Q8C1Z7 520 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Atxn7l2Q8C8K6 696 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Zfp446Q8C9M8 523 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 TbceQ8CIV8 524 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Hmgcs1Q8JZK9 520 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 TrhdeQ8K093 1025 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Ntng1Q8R4G0 539 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Abhd4Q8VD66 342 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Olfr693Q8VF89 316 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Olfr165Q8VFA2 313 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Olfr229Q8VFN5 307 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Mrgpra7Q91ZC5 305 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Dpy30Q99LT0 99 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Slc29a3Q99P65 475 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Trap1Q9CQN1 706 aaKnown RBP10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Q9CYS6 286 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Cep97Q9CZ62 856 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Cthrc1Q9D1D6 245 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Sun1Q9D666 913 aaKnown RBP10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Med8Q9D7W5 268 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Olfr930Q9EQ99 308 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Lancl2Q9JJK2 450 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Arpc3Q9JM76 178 aaKnown RBP10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Mageh1Q9NWG9 218 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Capn7Q9R1S8 813 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Kcne3Q9WTW2 103 aa10.55□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Scgb2b21A0A087WQA9 112 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Gm21731A0A286YDE9 180 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Map7d3A2AEY4 876 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Gm14399A2ARW8 610 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Usp36B1AQJ2 1098 aaKnown RBP10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 RerglB2RVE2 204 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Fam46aD3Z5S8 447 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Olfr740E9PV79 311 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Csnk2a2O54833 350 aaKnown RBP10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Il1rl1P14719 567 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Gstm2P15626 218 aa10.54□□□□□ -0.72
Ccdc28b-201ENSMUST00000030586 Pcsk2P21661 637 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms