RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KCNK6Q9Y257 313 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 SLC9A8Q9Y2E8 581 aa13.79□□□□□ -0.2
SCARB2-221ENST00000640341 MRPS23Q9Y3D9 190 aaKnown RBP13.79□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF670-ZNF695F2Z2N8 137 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 NDUFS4O43181 175 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 SPINT1O43278 529 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 PRNPP04156 253 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 PSPHP78330 225 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 SCN1BQ07699 218 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 C9orf64Q5T6V5 341 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 FAM129CQ86XR2 697 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 LRRC56Q8IYG6 542 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 ENKURQ8TC29 256 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 CXorf40AQ8TE69 158 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 MTERF3Q96E29 417 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 RNFT2Q96EX2 444 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 FAM46AQ96IP4 442 aaKnown RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 COQ10AQ96MF6 247 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 TMEM246Q9BRR3 403 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 CCDC32Q9BV29 185 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 GLIPR2Q9H4G4 154 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 KLHL31Q9H511 634 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 SIRT3Q9NTG7 399 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 NOX1Q9Y5S8 564 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 KCNE3Q9Y6H6 103 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 SPEGQ15772 3267 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 ERI3O43414 337 aaKnown RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 HMGN2P05204 90 aaKnown RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 CEBPBP17676 345 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 APEX1P27695 318 aaKnown RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 CCR8P51685 355 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 PDZD3Q86UT5 571 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 DCUN1D3Q8IWE4 304 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 UBQLNLQ8IYU4 475 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 OR4F15Q8NGB8 312 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 OR2L2Q8NH16 312 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 OR52P1PQ8NH57 321 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 TM9SF4Q92544 642 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 C12orf66Q96MD2 445 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 MS4A8Q9BY19 250 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 C11orf54Q9H0W9 315 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 KCND3Q9UK17 655 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 A0A1B0GVC2 190 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 GSAPA4D1B5 854 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 TBC1D3BA6NDS4 549 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 A6NIN4 97 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 OR52A4PA6NMU1 304 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 PGRMC2O15173 223 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 SLC35G4P0C7Q5 338 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 PSKH1P11801 424 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 CELP19835 753 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 ACADLP28330 430 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 FAM46CQ5VWP2 391 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 DGLUCYQ7Z3D6 616 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF582Q96NG8 517 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF717Q9BY31 904 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 LSM2Q9Y333 95 aaKnown RBP13.78□□□□□ -0.2
SCARB2-221ENST00000640341 C2orf92A0A1B0GVN3 265 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 HYKKA2RU49 373 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 IGLON5A6NGN9 336 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 OTOL1A6NHN0 477 aaPredicted RBP13.77□□□□□ -0.2
SCARB2-221ENST00000640341 RAB36O95755 333 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 MAPK9P45984 424 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 INPP1P49441 399 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 BCL2A1Q16548 175 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF791Q3KP31 576 aaPredicted RBP13.77□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF730Q6ZMV8 503 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 IKBIPQ70UQ0 350 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 PROKR2Q8NFJ6 384 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 TEX47Q8TBZ9 253 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 TMA7Q9Y2S6 64 aaKnown RBP13.77□□□□□ -0.2
SCARB2-221ENST00000640341 SCN3AQ9NY46 2000 aa13.77□□□□□ -0.2
SCARB2-221ENST00000640341 FAM183AA6NL82 134 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 SEMA3DO95025 777 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 S100A1P23297 94 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 GPR4P46093 362 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 SLC16A1P53985 500 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF77Q15935 545 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 SMARCD3Q6STE5 483 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 SLC30A8Q8IWU4 369 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 KAT2AQ92830 837 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 RGMAQ96B86 450 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 KCTD7Q96MP8 289 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 SRRQ9GZT4 340 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 OR52A5Q9H2C5 316 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 CLCA2Q9UQC9 943 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 AP1M2Q9Y6Q5 423 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 FAM170BA6NMN3 283 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 CHRM4P08173 479 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 SNRPGP62308 76 aaKnown RBP13.77□□□□□ -0.21
SCARB2-221ENST00000640341 IL18Q14116 193 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 ELOAQ14241 798 aaKnown RBP13.77□□□□□ -0.21
SCARB2-221ENST00000640341 DDI2Q5TDH0 399 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 VRK2Q86Y07 508 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 CAPN10Q9HC96 672 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 MOV10Q9HCE1 1003 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms