RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	CREB3L4	Q8TEY5	395 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ASB12	Q8WXK4	309 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	LRRN3	Q9H3W5	708 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	CCRL2	O00421	344 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	DIRAS3	O95661	229 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	MT-ND2	P03891	347 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	CXCL12	P48061	93 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	AFF1	P51825	1210 aa	Known RBP	13.25	□□□□□ -0.29
MED17-222	ENST00000640027	GRB7	Q14451	532 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ZNF440	Q8IYI8	595 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ELMOD2	Q8IZ81	293 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	OR52B6	Q8NGF0	335 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ZNF778	Q96MU6	729 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	SFXN2	Q96NB2	322 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ZFYVE21	Q9BQ24	234 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ACSL6	Q9UKU0	697 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	TRBV2	A0A0J9YWF9	115 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	SDHD	O14521	159 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	KIAA0355	O15063	1070 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	GTF2F2	P13984	249 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	BPI	P17213	487 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	RIDA	P52758	137 aa	Known RBP	13.25	□□□□□ -0.29
MED17-222	ENST00000640027	EEF1A1P5	Q5VTE0	462 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	OR8J3	Q8NGG0	315 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	SCGB1C1	Q8TD33	95 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	HOXB13	Q92826	284 aa	Predicted RBP	13.25	□□□□□ -0.29
MED17-222	ENST00000640027	SLC6A7	Q99884	636 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ZNF350	Q9GZX5	532 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	CCDC86	Q9H6F5	360 aa	Known RBP	13.25	□□□□□ -0.29
MED17-222	ENST00000640027	EXTL2	Q9UBQ6	330 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	CD207	Q9UJ71	328 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	SCN7A	Q01118	1682 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027		H7C417	338 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ANKRD28	O15084	1053 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	CKMT1A	P12532	417 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	NDUFV2	P19404	249 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	EMP2	P54851	167 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	XKRX	Q6PP77	449 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.25	□□□□□ -0.29
MED17-222	ENST00000640027	OR2T4	Q8NH00	348 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	PRR11	Q96HE9	360 aa	Predicted RBP	13.25	□□□□□ -0.29
MED17-222	ENST00000640027	PIP5K1A	Q99755	562 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	ATG5	Q9H1Y0	275 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	COL4A1	P02462	1669 aa		13.25	□□□□□ -0.29
MED17-222	ENST00000640027	DOCK2	Q92608	1830 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	UNC119B	A6NIH7	251 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	SLC22A31	A6NKX4	558 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	DRD1	P21728	446 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	SOX9	P48436	509 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	CD97	P48960	835 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	GSTM4	Q03013	218 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	HNRNPA0	Q13151	305 aa	Known RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	LDLRAD1	Q5T700	205 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	TAS1R3	Q7RTX0	852 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	CEACAM19	Q7Z692	300 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ADAMTS18	Q8TE60	1221 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	TMEM40	Q8WWA1	233 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	CDH20	Q9HBT6	801 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	OR2S2	Q9NQN1	319 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	SCML1	Q9UN30	329 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	PTGES	O14684	152 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	RFPL1	O75677	317 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ALDOA	P04075	364 aa	Known RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ACVR1B	P36896	505 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	PSMA6	P60900	246 aa	Known RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	NIPAL4	Q0D2K0	466 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	RBM39	Q14498	530 aa	Known RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	GNMT	Q14749	295 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	TMEM69	Q5SWH9	247 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	LIPK	Q5VXJ0	399 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	FAM205BP	Q63HN1	556 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	FCRL3	Q96P31	734 aa	Predicted RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	RBM24	Q9BX46	236 aa	Known RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	DNTTIP1	Q9H147	329 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	COPZ2	Q9P299	210 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ZNF831	Q5JPB2	1677 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	SNED1	Q8TER0	1413 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027		A6NL46	340 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ZNF850	A8MQ14	1090 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027		H3BSA7	217 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	SFTPD	P35247	375 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	XKR5	Q6UX68	686 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	TMEM135	Q86UB9	458 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	TCEAL8	Q8IYN2	117 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	C12orf43	Q96C57	262 aa	Known RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	TRIB3	Q96RU7	358 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	CCNL2	Q96S94	520 aa	Predicted RBP	13.24	□□□□□ -0.29
MED17-222	ENST00000640027	MYNN	Q9NPC7	610 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ABCG2	Q9UNQ0	655 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	HSPB11	Q9Y547	144 aa		13.24	□□□□□ -0.29
MED17-222	ENST00000640027	ABCB7	O75027	752 aa		13.23	□□□□□ -0.29
MED17-222	ENST00000640027	YES1	P07947	543 aa		13.23	□□□□□ -0.29
MED17-222	ENST00000640027	PABPC4L	P0CB38	370 aa	Known RBP	13.23	□□□□□ -0.29
MED17-222	ENST00000640027	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.23	□□□□□ -0.29
MED17-222	ENST00000640027	GRPR	P30550	384 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms