RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ERVK-11Q9UQG0 969 aa20.12■□□□□ 0.81
SCN1B-206ENST00000638536 FREM3P0C091 2139 aa20.12■□□□□ 0.81
SCN1B-206ENST00000638536 DIDO1Q9BTC0 2240 aaKnown RBP20.11■□□□□ 0.81
SCN1B-206ENST00000638536 A0A0G2JMM0 328 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 A0A1W2PPB8 328 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 A0A1W2PRS3 328 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 KIR3DP1A8MWS1 328 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 CDK2AP1O14519 115 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 ZIC2O95409 532 aaPredicted RBP20.11■□□□□ 0.81
SCN1B-206ENST00000638536 GPX3P22352 226 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 EMDP50402 254 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 TDGF1P3P51864 188 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 INAQ16352 499 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 NNATQ16517 81 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 BCORP1Q8N888 145 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 TMEM178AQ8NBL3 297 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 PSD4Q8NDX1 1056 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 OR7G1Q8NGA0 311 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 TMEM125Q96AQ2 219 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 FRMD6Q96NE9 622 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 SLX1AQ9BQ83 275 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 ITPAQ9BY32 194 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 REEP4Q9H6H4 257 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 AKTIPQ9H8T0 292 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 AGPAT4Q9NRZ5 378 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 GIMAP4Q9NUV9 329 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 THAP1Q9NVV9 213 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 DOPEY2Q9Y3R5 2298 aa20.11■□□□□ 0.81
SCN1B-206ENST00000638536 PINLYPA6NC86 204 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 ASPDHA6ND91 283 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 G3V3Y1 287 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 MPIP34949 423 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 RFC3P40938 356 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 NCBP2P52298 156 aaKnown RBP eCLIP20.1■□□□□ 0.81
SCN1B-206ENST00000638536 KCNC4Q03721 635 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 SRSF1Q07955 248 aaKnown RBP eCLIP20.1■□□□□ 0.81
SCN1B-206ENST00000638536 EIF2S3LQ2VIR3 472 aaKnown RBP20.1■□□□□ 0.81
SCN1B-206ENST00000638536 ZNF791Q3KP31 576 aaPredicted RBP20.1■□□□□ 0.81
SCN1B-206ENST00000638536 FHL5Q5TD97 284 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 C6orf163Q5TEZ5 329 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 ATCAYQ86WG3 371 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 AMDHD1Q96NU7 426 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 NXF5Q9H1B4 397 aaKnown RBP20.1■□□□□ 0.81
SCN1B-206ENST00000638536 OLAHQ9NV23 265 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 MARCOQ9UEW3 520 aaPredicted RBP20.1■□□□□ 0.81
SCN1B-206ENST00000638536 NCKAP5O14513 1909 aa20.1■□□□□ 0.81
SCN1B-206ENST00000638536 CCL3P10147 92 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 EFNA1P20827 205 aaPredicted RBP20.09■□□□□ 0.81
SCN1B-206ENST00000638536 OCRLQ01968 901 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 PDE7AQ13946 482 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 ZNF551Q7Z340 670 aaPredicted RBP20.09■□□□□ 0.81
SCN1B-206ENST00000638536 HOMEZQ8IX15 550 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 PRR22Q8IZ63 422 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 SAMD14Q8IZD0 417 aaPredicted RBP20.09■□□□□ 0.81
SCN1B-206ENST00000638536 KRTCAP2Q8N6L1 136 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 NR4A3Q92570 626 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 ZNF75CPQ92670 426 aaPredicted RBP20.09■□□□□ 0.81
SCN1B-206ENST00000638536 TSPAN10Q9H1Z9 355 aaPredicted RBP20.09■□□□□ 0.81
SCN1B-206ENST00000638536 PEX1O43933 1283 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 SNUPNO95149 360 aaKnown RBP20.09■□□□□ 0.81
SCN1B-206ENST00000638536 KITP10721 976 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 G6PDP11413 515 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 MC3RP41968 323 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 MEOX1P50221 254 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 DESI1Q6ICB0 168 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 OPN5Q6U736 354 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 TMEM107Q6UX40 140 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 FAM9CQ8IZT9 166 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 OR7A2PQ8NGA2 310 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 SLC22A8Q8TCC7 542 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 SH3BP4Q9P0V3 963 aa20.09■□□□□ 0.81
SCN1B-206ENST00000638536 MYO7BQ6PIF6 2116 aa20.08■□□□□ 0.81
SCN1B-206ENST00000638536 DIO3P55073 304 aa20.08■□□□□ 0.8
SCN1B-206ENST00000638536 GPALPP1Q8IXQ4 340 aa20.08■□□□□ 0.8
SCN1B-206ENST00000638536 OR10G3Q8NGC4 313 aa20.08■□□□□ 0.8
SCN1B-206ENST00000638536 OR5M3Q8NGP4 307 aa20.08■□□□□ 0.8
SCN1B-206ENST00000638536 TP53INP1Q96A56 240 aa20.08■□□□□ 0.8
SCN1B-206ENST00000638536 PPCDCQ96CD2 204 aa20.08■□□□□ 0.8
SCN1B-206ENST00000638536 SPACA9Q96E40 222 aaPredicted RBP20.08■□□□□ 0.8
SCN1B-206ENST00000638536 SH2D2AQ9NP31 389 aa20.08■□□□□ 0.8
SCN1B-206ENST00000638536 TIMMDC1Q9NPL8 285 aa20.08■□□□□ 0.8
SCN1B-206ENST00000638536 ANKUB1A6NFN9 424 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 PLOD3O60568 738 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 TBX19O60806 448 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 FBXO45P0C2W1 286 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 ASMTP46597 345 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 EMX2Q04743 252 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 HLA-DQA1Q5Y7H0 255 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 ATG16L1Q676U5 607 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 RTL4Q6ZR62 310 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 SLC15A4Q8N697 577 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 RAB3IL1Q8TBN0 382 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 CLMPQ9H6B4 373 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 MEAF6Q9HAF1 191 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 KLF13Q9Y2Y9 288 aaPredicted RBP20.07■□□□□ 0.8
SCN1B-206ENST00000638536 NPFFR2Q9Y5X5 522 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 PCNX1Q96RV3 2341 aa20.07■□□□□ 0.8
SCN1B-206ENST00000638536 HMGB1P1B2RPK0 211 aaPredicted RBP20.06■□□□□ 0.8
SCN1B-206ENST00000638536 SCAMP2O15127 329 aaKnown RBP20.06■□□□□ 0.8
SCN1B-206ENST00000638536 PDPK1O15530 556 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms