RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 KIF17Q9P2E2 1029 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SUSD2Q9UGT4 822 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 LIPT1Q9Y234 373 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 KCNE3Q9Y6H6 103 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 A0A087WV62 115 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 A0A0G2JPF8 293 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 DUXAA6NLW8 204 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 HNRNPCL2B2RXH8 293 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 HNRNPCL3B7ZW38 293 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 J3KTA2 159 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 SLC16A6O15403 523 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 LAMTOR5O43504 91 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 DUX1O43812 170 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 MITFO75030 526 aaPredicted RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 JRKO75564 520 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 SEC24DO94855 1032 aaPredicted RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 NSA2O95478 260 aaKnown RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 TFAP2AP05549 437 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 HNRNPCL4P0DMR1 293 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 RNH1P13489 461 aaKnown RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 CDH2P19022 906 aaPredicted RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 YAP1P46937 504 aaKnown RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 CDH12P55289 794 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 GPAT3Q53EU6 434 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 ATAD3BQ5T9A4 648 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 OLIG3Q7RTU3 272 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 GALNT5Q7Z7M9 940 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 ATG16L2Q8NAA4 619 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 TSPAN14Q8NG11 270 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 ZNF675Q8TD23 568 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 ADAMTS18Q8TE60 1221 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 ANKRD9Q96BM1 317 aaPredicted RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 SLC38A1Q9H2H9 487 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 GIN1Q9NXP7 522 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 KLHL3Q9UH77 587 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 KCND3Q9UK17 655 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 PILRBQ9UKJ0 227 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 C19orf53Q9UNZ5 99 aaPredicted RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 FAM32AQ9Y421 112 aaKnown RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 MN1Q10571 1320 aaPredicted RBP11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 DSPPQ9NZW4 1301 aa11.48□□□□□ -0.57
CACNA1D-228ENST00000638120 CACNA1EQ15878 2313 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 COL6A3P12111 3177 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 LOC100130705A0A1B0GUX0 176 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 HYKKA2RU49 373 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 EME2A4GXA9 379 aaPredicted RBP11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 FITM1A5D6W6 292 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 PLOD3O60568 738 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 AGR2O95994 175 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 ATP6V1B1P15313 513 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 EPHA8P29322 1005 aaPredicted RBP11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 LIMS1P48059 325 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 HMGA2P52926 109 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 GPLD1P80108 840 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 IL18R1Q13478 541 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 PRICKLE4Q2TBC4 344 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 FAM214AQ32MH5 1076 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 LIN52Q52LA3 116 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 RNF220Q5VTB9 566 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 HEPHL1Q6MZM0 1159 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 KANSL1Q7Z3B3 1105 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 THAP5Q7Z6K1 395 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 PLXDC1Q8IUK5 500 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 OR6C4Q8NGE1 309 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 ADAMTS15Q8TE58 950 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 GIPC3Q8TF64 312 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 TRNT1Q96Q11 434 aaKnown RBP11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 YTHDF1Q9BYJ9 559 aaKnown RBP11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 FAM192AQ9GZU8 254 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 KRT84Q9NSB2 600 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 ACER3Q9NUN7 267 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 MAT2BQ9NZL9 334 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 HCN3Q9P1Z3 774 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 PCDH15Q96QU1 1955 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 CCDC88CQ9P219 2028 aa11.47□□□□□ -0.57
CACNA1D-228ENST00000638120 BLACEA4D250 179 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 A8MVJ9 347 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 CASC3O15234 703 aaKnown RBP11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 B4GAT1O43505 415 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 NME6O75414 186 aaPredicted RBP11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 GADD45GO95257 159 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 BMP10O95393 424 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 NT5EP21589 574 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 CSF2RBP32927 897 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 POLR2IP36954 125 aaKnown RBP11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 RPL5P46777 297 aaKnown RBP11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 MAPK10P53779 464 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 EMP3P54852 163 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 CFHR1Q03591 330 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 MICAQ29983 383 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 EXOC3L2Q2M3D2 409 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 PLK5Q496M5 336 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 TRMT12Q53H54 448 aaKnown RBP11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 EXOSC6Q5RKV6 272 aaKnown RBP11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 ZNF691Q5VV52 312 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 FOXB2Q5VYV0 432 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 C16orf62Q7Z3J2 963 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 MAML2Q8IZL2 1156 aaPredicted RBP11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 SLC16A11Q8NCK7 471 aa11.46□□□□□ -0.57
CACNA1D-228ENST00000638120 SIMC1Q8NDZ2 872 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms