RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 MRPS35P82673 323 aaKnown RBP15.73■□□□□ 0.11
LIN28B-202ENST00000635857 BST1Q10588 318 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 CEBPEQ15744 281 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 EIF2S3LQ2VIR3 472 aaKnown RBP15.73■□□□□ 0.11
LIN28B-202ENST00000635857 ZNF628Q5EBL2 1059 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 SLC22A10Q63ZE4 541 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 FAM47EQ6ZV65 393 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 SULF2Q8IWU5 870 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 FAM26EQ8N5C1 309 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 CPSF7Q8N684 471 aaKnown RBP15.73■□□□□ 0.11
LIN28B-202ENST00000635857 CLHC1Q8NHS4 586 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 KAT2AQ92830 837 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 MTERF3Q96E29 417 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 EGLN2Q96KS0 407 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 FCRL1Q96LA6 429 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 ATP6V1G3Q96LB4 118 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 ACBD3Q9H3P7 528 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 REEP4Q9H6H4 257 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 VIPAS39Q9H9C1 493 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 TAS2R9Q9NYW1 312 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 TAS2R7Q9NYW3 318 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 SH3BP4Q9P0V3 963 aa15.73■□□□□ 0.11
LIN28B-202ENST00000635857 HELZ2Q9BYK8 2649 aaKnown RBP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 MYO1GB0I1T2 1018 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 UNC5CO95185 931 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 BCKDHAP12694 445 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 TACR1P25103 407 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 KRT20P35900 424 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 CASP6P55212 293 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 PSPHP78330 225 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 DUSP2Q05923 314 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 RPS6KA2Q15349 733 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 TRMT12Q53H54 448 aaKnown RBP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 KRTCAP3Q53RY4 240 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 C6orf136Q5SQH8 315 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 ZNF324BQ6AW86 544 aaPredicted RBP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 ZNF227Q86WZ6 799 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 LIX1Q8N485 282 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 CTHRC1Q96CG8 243 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 HSPBAP1Q96EW2 488 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 ZBED6CLQ96FA7 236 aaPredicted RBP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 ZNF764Q96H86 408 aaPredicted RBP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 MAGED4Q96JG8 741 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 LCORQ96JN0 433 aaPredicted RBP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 PPP1R36Q96LQ0 422 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 PRPF18Q99633 342 aaKnown RBP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 FAM173AQ9BQD7 235 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 C1orf50Q9BV19 199 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 ITPAQ9BY32 194 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 ATAD3AQ9NVI7 634 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 DDX18Q9NVP1 670 aaKnown RBP15.72■□□□□ 0.11
LIN28B-202ENST00000635857 THAP1Q9NVV9 213 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 BAIAP2L1Q9UHR4 511 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 ZNF639Q9UID6 485 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 NPFFR2Q9Y5X5 522 aa15.72■□□□□ 0.11
LIN28B-202ENST00000635857 NPIPA5E9PKD4 350 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 ACOX3O15254 700 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 NADKO95544 446 aaPredicted RBP15.71■□□□□ 0.11
LIN28B-202ENST00000635857 CBX7O95931 251 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 FBXO45P0C2W1 286 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 H2AFXP16104 143 aaPredicted RBP15.71■□□□□ 0.11
LIN28B-202ENST00000635857 S1PR1P21453 382 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 CNR1P21554 472 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 TDGF1P3P51864 188 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 WDR4P57081 412 aaKnown RBP15.71■□□□□ 0.11
LIN28B-202ENST00000635857 KCNJ2P63252 427 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 PLCXD2Q0VAA5 305 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 MGAT2Q10469 447 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 ZNF155Q12901 538 aaPredicted RBP15.71■□□□□ 0.11
LIN28B-202ENST00000635857 NNATQ16517 81 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 SMU1Q2TAY7 513 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 ZNF441Q8N8Z8 693 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 OR2M7Q8NG81 312 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 OR5M3Q8NGP4 307 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 DYDC1Q8WWB3 177 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 C3orf30Q96M34 536 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 TSPAN10Q9H1Z9 355 aaPredicted RBP15.71■□□□□ 0.11
LIN28B-202ENST00000635857 NOP53Q9NZM5 478 aaKnown RBP15.71■□□□□ 0.11
LIN28B-202ENST00000635857 CNIH4Q9P003 139 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 GIMAP2Q9UG22 337 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 NPIPA1Q9UND3 350 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 MAPRE3Q9UPY8 281 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 OSGIN2Q9Y236 505 aa15.71■□□□□ 0.11
LIN28B-202ENST00000635857 PRRC2CQ9Y520 2896 aaKnown RBP15.71■□□□□ 0.11
LIN28B-202ENST00000635857 ESPL1Q14674 2120 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 HMGB1P1B2RPK0 211 aaPredicted RBP15.7■□□□□ 0.1
LIN28B-202ENST00000635857 G3V3Y1 287 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 PLOD3O60568 738 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 MST1P26927 711 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 MANFP55145 182 aaKnown RBP15.7■□□□□ 0.1
LIN28B-202ENST00000635857 HSPB3Q12988 150 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 ZNHIT3Q15649 155 aaPredicted RBP15.7■□□□□ 0.1
LIN28B-202ENST00000635857 NTRK2Q16620 822 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.7■□□□□ 0.1
LIN28B-202ENST00000635857 ZNF791Q3KP31 576 aaPredicted RBP15.7■□□□□ 0.1
LIN28B-202ENST00000635857 TBCELQ5QJ74 424 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 IL23RQ5VWK5 629 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 PAOXQ6QHF9 649 aa15.7■□□□□ 0.1
LIN28B-202ENST00000635857 TMEM107Q6UX40 140 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms