RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 GPR34Q9UPC5 381 aa14.36□□□□□ -0.11
LINC00552-201ENST00000625151 HIDE1A8MVS5 230 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 CACNB4O00305 520 aaPredicted RBP14.35□□□□□ -0.11
LINC00552-201ENST00000625151 EFCAB14O75071 495 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 CSF3P09919 207 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 DDX6P26196 483 aaKnown RBP eCLIP14.35□□□□□ -0.11
LINC00552-201ENST00000625151 SDC2P34741 201 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 DDOSTP39656 456 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 RPS25P62851 125 aaKnown RBP14.35□□□□□ -0.11
LINC00552-201ENST00000625151 HTRA4P83105 476 aaPredicted RBP14.35□□□□□ -0.11
LINC00552-201ENST00000625151 BNC1Q01954 994 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 TBRG1Q3YBR2 411 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 ARHGAP15Q53QZ3 475 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 UBE3DQ7Z6J8 389 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 NATD1Q8N6N6 113 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 SYT14Q8NB59 555 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 PLA2G15Q8NCC3 412 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 MORN4Q8NDC4 146 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 OR6T1Q8NGN1 323 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 SLC35G5Q96KT7 338 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 SNX18Q96RF0 628 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 PELI2Q9HAT8 420 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 TRPC4Q9UBN4 977 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 FBXW2Q9UKT8 454 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 XIRP2A4UGR9 3374 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 FAM172BPA6NC97 362 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 AGRPO00253 132 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 NR2F1P10589 423 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 ST8SIA6P61647 398 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 EFNB1P98172 346 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 CDK5Q00535 292 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 SCN1BQ07699 218 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 ASAH1Q13510 395 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 DHCR24Q15392 516 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 SLC25A30Q5SVS4 291 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 CD300LDQ6UXZ3 194 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 NUDT13Q86X67 352 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 KIF18BQ86Y91 864 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 CLDN22Q8N7P3 220 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 NXPE3Q969Y0 559 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 DIRAS2Q96HU8 199 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 GLIPR2Q9H4G4 154 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 TM7SF3Q9NS93 570 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 ZSCAN32Q9NX65 697 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 BOLA1Q9Y3E2 137 aa14.35□□□□□ -0.11
LINC00552-201ENST00000625151 FABP12A6NFH5 140 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 NDUFS4O43181 175 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 PRKRAO75569 313 aaKnown RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 LGI1O95970 557 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 PRNPP04156 253 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 ERGP11308 486 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 MYOGP15173 224 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 SSTR4P31391 388 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 WNT4P56705 351 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 COX10Q12887 443 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 SNAPC1Q16533 368 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 ZNF765Q7L2R6 523 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 TP53I13Q8NBR0 393 aaPredicted RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 GATAD2BQ8WXI9 593 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 C11orf54Q9H0W9 315 aaPredicted RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 EGLN3Q9H6Z9 239 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 WASH6PQ9NQA3 447 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 WDR70Q9NW82 654 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 HOXC11O43248 304 aaPredicted RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 TSPAN19P0C672 248 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 ERVFC1P60507 584 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 RACK1P63244 317 aaKnown RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 MRPS15P82914 257 aaKnown RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 REEP5Q00765 189 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 DPTQ07507 201 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 C1orf94Q6P1W5 598 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 XKRXQ6PP77 449 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 ING5Q8WYH8 240 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 LRRC3BQ96PB8 259 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 TM9SF2Q99805 663 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 TTYH2Q9BSA4 534 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 YIPF4Q9BSR8 244 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 MENTQ9BUN1 341 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 SLC22A4Q9H015 551 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 ACSS1Q9NUB1 689 aaPredicted RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 ZCCHC3Q9NUD5 404 aaKnown RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 TOR4AQ9NXH8 423 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 GPR52Q9Y2T5 361 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 SF3B6Q9Y3B4 125 aaKnown RBP14.34□□□□□ -0.11
LINC00552-201ENST00000625151 DOCK9Q9BZ29 2069 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 CEP290O15078 2479 aa14.34□□□□□ -0.11
LINC00552-201ENST00000625151 CENPXA8MT69 81 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 PRRT4C9JH25 899 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 LCMT2O60294 686 aaKnown RBP14.33□□□□□ -0.11
LINC00552-201ENST00000625151 TMCC2O75069 709 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 CHRM4P08173 479 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 ADRB3P13945 408 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 GPC1P35052 558 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 SLC9A3P48764 834 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 CCR8P51685 355 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 CAV3P56539 151 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 FUT5Q11128 374 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 GPR19Q15760 415 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 C3orf38Q5JPI3 329 aa14.33□□□□□ -0.11
LINC00552-201ENST00000625151 SHFQ7M4L6 423 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms