RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 OR14A16Q8NHC5 309 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 PRR7Q8TB68 274 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 YIPF3Q9GZM5 350 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 POLR2J3Q9H1A7 115 aaKnown RBP6.01□□□□□ -1.45
CDKL5-205ENST00000623535 HS3ST3A1Q9Y663 406 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 CLCA1A8K7I4 914 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 ZNF785A8K8V0 405 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 DDAH2O95865 285 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 CSN2P05814 226 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 CTSAP10619 480 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 F8A1P23610 371 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 PTGS2P35354 604 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 RAB4BP61018 213 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 GPLD1P80108 840 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 ZNF613Q6PF04 617 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 USP30Q70CQ3 517 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 TRIM46Q7Z4K8 759 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 SFRP1Q8N474 314 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 OR5D16Q8NGK9 328 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 PIGQQ9BRB3 760 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 LRRN3Q9H3W5 708 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 ZBTB20Q9HC78 741 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-205ENST00000623535 KCNIP2Q9NS61 270 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 CFAP20Q9Y6A4 193 aaKnown RBP6.01□□□□□ -1.45
CDKL5-205ENST00000623535 PNMTP11086 282 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 VAMP1P23763 118 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 LARP4Q71RC2 724 aaKnown RBP eCLIP6.01□□□□□ -1.45
CDKL5-205ENST00000623535 SKA3Q8IX90 412 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 ZNF784Q8NCA9 323 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-205ENST00000623535 CXorf56Q9H5V9 222 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 MINDY3Q9H8M7 445 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 TRAF6Q9Y4K3 522 aa6.01□□□□□ -1.45
CDKL5-205ENST00000623535 ZNF732B4DXR9 585 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 RPP14O95059 124 aaKnown RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 PRKCAP17252 672 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 ATF6P18850 670 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 AMY2BP19961 511 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 HOXC13P31276 330 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 ATPAF1Q5TC12 328 aaPredicted RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 SHFQ7M4L6 423 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 ZNF584Q8IVC4 421 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 FBXW8Q8N3Y1 598 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 SHKBP1Q8TBC3 707 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 TSACCQ96A04 125 aaPredicted RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 BORCS6Q96GS4 357 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 MTERF1Q99551 399 aaKnown RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 ZNF160Q9HCG1 818 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 RNF6Q9Y252 685 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 GABRA3P34903 492 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 SFTPDP35247 375 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 CX3CR1P49238 355 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 XKP51811 444 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 SIRPAP78324 504 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 NKX3-2P78367 333 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 GTF2BQ00403 316 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 TLE4Q04727 773 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 LCLAT1Q6UWP7 414 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 CPSF7Q8N684 471 aaKnown RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 ACTRT1Q8TDG2 376 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 TP53INP1Q96A56 240 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 ZBTB45Q96K62 511 aaPredicted RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 TAAR9Q96RI9 348 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 S1PR3Q99500 378 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 TMEM181Q9P2C4 612 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 CDH10Q9Y6N8 788 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 TRBV11-1A0A0K0K1C0 115 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 ZBTB11O95625 1053 aaPredicted RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 PRSS56P0CW18 603 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 CRABP1P29762 137 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 SLC6A4P31645 630 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 MAGEA11P43364 429 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 GPR176Q14439 515 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 ECM1Q16610 540 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 KCTD21Q4G0X4 260 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 C19orf35Q6ZS72 473 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 OR1N1Q8NGS0 311 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 C2orf78A6NCI8 922 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 AQP9O43315 295 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 SPP1P10451 314 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 DSC2Q02487 901 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 CTSL3PQ5NE16 218 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 CHAC2Q8WUX2 184 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 CPPED1Q9BRF8 314 aaPredicted RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 HRASLSQ9HDD0 168 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 RABL2AQ9UBK7 228 aaPredicted RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 RABL2BQ9UNT1 228 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 SLIT1O75093 1534 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 KIF20BQ96Q89 1820 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 A0A0J9YY10 115 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 SLC7A4O43246 635 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 RFPL3O75679 317 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 APOL3O95236 402 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 GNAO1P09471 354 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 GKN3PP0CG01 181 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 ACTA2P62736 377 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 ACTG2P63267 376 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 CBLBQ13191 982 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 TSGA10IPQ3SY00 556 aa6□□□□□ -1.45
CDKL5-205ENST00000623535 PAN3Q58A45 887 aaKnown RBP6□□□□□ -1.45
CDKL5-205ENST00000623535 CLVS2Q5SYC1 327 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms