RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TRIM10Q9UDY6 481 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 ATP6V1HQ9UI12 483 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 FBXW2Q9UKT8 454 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 DNPEPQ9ULA0 475 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 VSIG4Q9Y279 399 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 PLEKHA6Q9Y2H5 1048 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 NSG2Q9Y328 171 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 MAB21L2Q9Y586 359 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 GMEB1Q9Y692 573 aa3.29□□□□□ -1.88
BRCA1-229ENST00000621897 TRIM49BA6NDI0 452 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 F8WDY8 70 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 SSX5O60225 188 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 SH3BGRLO75368 114 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 VENTXO95231 258 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 LUC7L3O95232 432 aaKnown RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 FAM58BPP0C7Q3 252 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 RALAP11233 206 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 KRT3P12035 628 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 CD1DP15813 335 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 VCLP18206 1134 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ADRA2CP18825 462 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ACP1P24666 158 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 PSMA5P28066 241 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 SFNP31947 248 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 OTX2P32243 289 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 CTNNB1P35222 781 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 OR1G1P47890 313 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 AP3M2P53677 418 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 GFPT1Q06210 699 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 IL10RBQ08334 325 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 PLD1Q13393 1074 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ARHGAP19Q14CB8 494 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ZMYND11Q15326 602 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 KNOP1Q1ED39 458 aaKnown RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 LRIT3Q3SXY7 679 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ZNF542PQ5EBM4 170 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 CFAP157Q5JU67 520 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 BAIAP2L2Q6UXY1 529 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 Q6ZVQ6 151 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 C1orf186Q6ZWK4 172 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 TRMT11Q7Z4G4 463 aaKnown RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 COX8CQ7Z4L0 72 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 AMZ2Q86W34 360 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 CCDC185Q8N715 623 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 LILRB4Q8NHJ6 448 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 DNASE1L2Q92874 299 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 PEX13Q92968 403 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 DHTKD1Q96HY7 919 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ARL5BQ96KC2 179 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ZBTB18Q99592 522 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 RIOK1Q9BRS2 568 aaKnown RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ZSCAN5AQ9BUG6 496 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 CAPS2Q9BXY5 557 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 C8orf33Q9H7E9 229 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 RMND5AQ9H871 391 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 MOB1AQ9H8S9 216 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 ECT2Q9H8V3 914 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 C3orf14Q9HBI5 128 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 FAM212BQ9NTI7 297 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 DNAJC11Q9NVH1 559 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 UBAP1Q9NZ09 502 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 SLC12A6Q9UHW9 1150 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 BARX2Q9UMQ3 279 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 SNX6Q9UNH7 406 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 CELA1Q9UNI1 258 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 V9GYY5 206 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-229ENST00000621897 SPACA6W5XKT8 324 aa3.28□□□□□ -1.88
BRCA1-229ENST00000621897 KIAA1217Q5T5P2 1943 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 TRAV18A0A075B6X5 111 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 CFAP73A6NFT4 308 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 MFSD2BA6NFX1 497 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 LMO7DNF2Z398 122 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 RANBP6O60518 1105 aaKnown RBP3.27□□□□□ -1.89
BRCA1-229ENST00000621897 MTX2O75431 263 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 CSF2P04141 144 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 PCCBP05166 539 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 AREGP15514 252 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 HNRNPA2B1P22626 353 aaKnown RBP3.27□□□□□ -1.89
BRCA1-229ENST00000621897 PRKACBP22694 351 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 SSTR1P30872 391 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 BMI1P35226 326 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 FEN1P39748 380 aaKnown RBP3.27□□□□□ -1.89
BRCA1-229ENST00000621897 CCT6AP40227 531 aaKnown RBP3.27□□□□□ -1.89
BRCA1-229ENST00000621897 KRTAP10-8P60410 259 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 UBE2HP62256 183 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 OVGP1Q12889 678 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 PDZK1IP1Q13113 114 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 GRB14Q14449 540 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 FAM174BQ3ZCQ3 159 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 LRRC37A5PQ49AS3 106 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 LRRC73Q5JTD7 316 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 FAM91A1Q658Y4 838 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 RAET1GQ6H3X3 334 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 SPATA21Q7Z572 469 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 CROCCP3Q8IVE0 287 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 ZBED8Q8IZ13 594 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 TTC5Q8N0Z6 440 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 BATF2Q8N1L9 274 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms