RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 H0YIG0 161 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 CLDN4O14493 209 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 ARHGAP33O14559 1287 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 SNAP29O95721 258 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 CHRM4P08173 479 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 SLC35E2P0CK97 266 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 THRBP10828 461 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 FOLR1P15328 257 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 NELFEP18615 380 aaKnown RBP20.09■□□□□ 0.81
SPAST-204ENST00000621856 CD247P20963 164 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 FPR1P21462 350 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 MAN2A2P49641 1150 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 CHN2P52757 468 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 FUT5Q11128 374 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 DUSP7Q16829 419 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 ZNF528Q3MIS6 628 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 TMEM71Q6P5X7 295 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 UGT2A3Q6UWM9 527 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 OLIG3Q7RTU3 272 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 C16orf62Q7Z3J2 963 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 WDR53Q7Z5U6 358 aaPredicted RBP20.09■□□□□ 0.81
SPAST-204ENST00000621856 GPR135Q8IZ08 494 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 OR1L3Q8NH93 324 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 RASSF5Q8WWW0 418 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 PROX1Q92786 737 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 GTPBP2Q9BX10 602 aaKnown RBP20.09■□□□□ 0.81
SPAST-204ENST00000621856 OSBPL10Q9BXB5 764 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 ZNF768Q9H5H4 540 aaKnown RBP20.09■□□□□ 0.81
SPAST-204ENST00000621856 SYNDIG1Q9H7V2 258 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 ADAP2Q9NPF8 381 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 THSD1Q9NS62 852 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 USE1Q9NZ43 259 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 C19orf53Q9UNZ5 99 aaPredicted RBP20.09■□□□□ 0.81
SPAST-204ENST00000621856 GPC6Q9Y625 555 aaPredicted RBP20.09■□□□□ 0.81
SPAST-204ENST00000621856 CCDC88CQ9P219 2028 aa20.09■□□□□ 0.81
SPAST-204ENST00000621856 A0A087WV62 115 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 DUXAA6NLW8 204 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 HS6ST1O60243 411 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 CDC123O75794 336 aaPredicted RBP20.08■□□□□ 0.81
SPAST-204ENST00000621856 ALBP02768 609 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 SYPP08247 313 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 PRKACGP22612 351 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 CCL7P80098 99 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 STX4Q12846 297 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 ERV3-1Q14264 604 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 GK3PQ14409 553 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 PRICKLE4Q2TBC4 344 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 FHL5Q5TD97 284 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 TMEM154Q6P9G4 183 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 SLC23A3Q6PIS1 610 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 TTLL10Q6ZVT0 673 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 OR51Q1Q8NH59 317 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 ZNF675Q8TD23 568 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 SLC9A6Q92581 669 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 NAT6Q93015 286 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 ZNF300Q96RE9 604 aaPredicted RBP20.08■□□□□ 0.81
SPAST-204ENST00000621856 SPATA5L1Q9BVQ7 753 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 BCL2L10Q9HD36 194 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 EXD2Q9NVH0 621 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 MAT2BQ9NZL9 334 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 CALML5Q9NZT1 146 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 SCOCQ9UIL1 159 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 LIPT1Q9Y234 373 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 MAU2Q9Y6X3 613 aa20.08■□□□□ 0.81
SPAST-204ENST00000621856 A0A0G2JPF8 293 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 EME2A4GXA9 379 aaPredicted RBP20.07■□□□□ 0.8
SPAST-204ENST00000621856 HNRNPCL2B2RXH8 293 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 HNRNPCL3B7ZW38 293 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 H3BMH7 237 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 DPM1O60762 260 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 CTNSO60931 367 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 H6PDO95479 791 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 AGR2O95994 175 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 IFNW1P05000 195 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 RPLP0P05388 317 aaKnown RBP20.07■□□□□ 0.8
SPAST-204ENST00000621856 HNRNPCL4P0DMR1 293 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 ALAS2P22557 587 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 RRM2P31350 389 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 CAPGP40121 348 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 MAPK10P53779 464 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 PPP2R2BQ00005 443 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 BLMHQ13867 455 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 ZIK1Q3SY52 487 aaPredicted RBP20.07■□□□□ 0.8
SPAST-204ENST00000621856 KRT80Q6KB66 452 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 TSEN54Q7Z6J9 526 aaKnown RBP20.07■□□□□ 0.8
SPAST-204ENST00000621856 CARM1Q86X55 608 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 ZBTB44Q8NCP5 570 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 SIMC1Q8NDZ2 872 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 SLC35A4Q96G79 324 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 YIPF2Q9BWQ6 316 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 ANKRD60Q9BZ19 345 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 FANCEQ9HB96 536 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 GIN1Q9NXP7 522 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 SERTAD3Q9UJW9 196 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 FAM32AQ9Y421 112 aaKnown RBP20.07■□□□□ 0.8
SPAST-204ENST00000621856 TESMINQ9Y4I5 508 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 PRAMEF25A6NGN4 478 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 ADAMDEC1O15204 470 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 PLOD3O60568 738 aa20.07■□□□□ 0.8
SPAST-204ENST00000621856 FESP07332 822 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms