RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 CA5BQ9Y2D0 317 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 CD3GP09693 182 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 RPS3P23396 243 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ERVFC1P60507 584 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 TDGQ13569 410 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 TMEM201Q5SNT2 666 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ARHGAP11AQ6P4F7 1023 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 LEG1Q6P5S2 330 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 SLC15A3Q8IY34 581 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ZBED3Q96IU2 234 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 AIFM2Q9BRQ8 373 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 DCSTAMPQ9H295 470 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 CMAHPQ9Y471 501 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ADAMTS4O75173 837 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ABOP16442 354 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 POU3F4P49335 361 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ACTC1P68032 377 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ACTA1P68133 377 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 MLF2Q15773 248 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ALG10BQ5I7T1 473 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 MCATQ8IVS2 390 aaKnown RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ARHGAP12Q8IWW6 846 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 USB1Q9BQ65 265 aaKnown RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ULBP3Q9BZM4 244 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 DPAGT1Q9H3H5 408 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 AIG1Q9NVV5 245 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 NOP16Q9Y3C1 178 aaKnown RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ALDOAP04075 364 aaKnown RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 HOXC13P31276 330 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 GCGRP47871 477 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 POU4F2Q12837 409 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 STK11Q15831 433 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 FAM180BQ6P0A1 224 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 LCTLQ6UWM7 567 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 OR2L2Q8NH16 312 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ECHDC3Q96DC8 303 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 YTHDF1Q9BYJ9 559 aaKnown RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 C12orf4Q9NQ89 552 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 C2orf42Q9NWW7 574 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 NFS1Q9Y697 457 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 RNF215Q9Y6U7 377 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 A0A0G2JPF8 293 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 TRBV11-1A0A0K0K1C0 115 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 HNRNPCL3B7ZW38 293 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 EEDO75530 441 aaKnown RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 HNRNPCL4P0DMR1 293 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 CD79AP11912 226 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 POU3F2P20265 443 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 APLNRP35414 380 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 BCL2L15Q5TBC7 163 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 TANGO2Q6ICL3 276 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 LIPIQ6XZB0 460 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 COMMD6Q7Z4G1 85 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 PPP1R3BQ86XI6 285 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 OR52B6Q8NGF0 335 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 KCNN1Q92952 543 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 TCEAL3Q969E4 200 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ZUFSPQ96AP4 578 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 PCDH10Q9P2E7 1040 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 CPNE7Q9UBL6 633 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 SDHDO14521 159 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ATF6P18850 670 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 ROR2Q01974 943 aaKnown RBP10.82□□□□□ -0.68
CLIP1-219ENST00000620786 EFR3AQ14156 821 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 NFATC4Q14934 902 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 GPR26Q8NDV2 337 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 VN1R2Q8NFZ6 395 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 OR9A2Q8NGT5 310 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 PPP1R14BQ96C90 147 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 MS4A4EQ96PG1 132 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 IL26Q9NPH9 171 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 C5AR2Q9P296 337 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 TMEM14AQ9Y6G1 99 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 MYH1P12882 1939 aa10.82□□□□□ -0.68
CLIP1-219ENST00000620786 GXYLT2A0PJZ3 443 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 MYOGP15173 224 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 GALNT15Q8N3T1 639 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 FBXL20Q96IG2 436 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF471Q9BX82 626 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 TAAR2Q9P1P5 351 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 PCDHGB6Q9Y5F9 930 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 TMEM265A0A087WTH1 108 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 HSD17B12Q53GQ0 312 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ATAD3CQ5T2N8 411 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 DCAF12Q5T6F0 453 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 TMEM135Q86UB9 458 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 MFSD6LQ8IWD5 586 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 CLECL1Q8IZS7 167 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 ARL14Q8N4G2 192 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 GALNT11Q8NCW6 608 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 OR52E2Q8NGJ4 325 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 THAP6Q8TBB0 222 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 MOCOSQ96EN8 888 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 DMRTB1Q96MA1 342 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 CNN2Q99439 309 aaKnown RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 RNF38Q9H0F5 515 aa10.81□□□□□ -0.68
CLIP1-219ENST00000620786 MTHFD2LQ9H903 347 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 MCTS1Q9ULC4 181 aaKnown RBP10.81□□□□□ -0.68
CLIP1-219ENST00000620786 CAMK2AQ9UQM7 478 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms