RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FAM120BQ96EK7 910 aaKnown RBP12.66□□□□□ -0.38
NEK3-210ENST00000620675 OTUB1Q96FW1 271 aaPredicted RBP12.66□□□□□ -0.38
NEK3-210ENST00000620675 VMP1Q96GC9 406 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 FER1L6-AS2Q96M78 137 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 PELOQ9BRX2 385 aaKnown RBP12.66□□□□□ -0.38
NEK3-210ENST00000620675 CCDC106Q9BWC9 280 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 OR10A5Q9H207 317 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 MMP25Q9NPA2 562 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 PTGFRNQ9P2B2 879 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 BCAP29Q9UHQ4 241 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 ARL2BPQ9Y2Y0 163 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 SNX8Q9Y5X2 465 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 SVILO95425 2214 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 PLOD3O60568 738 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 EXT1Q16394 746 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 DPY19L1Q2PZI1 675 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 SZRD1Q7Z422 152 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 KBTBD2Q8IY47 623 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 OR4A15Q8NGL6 344 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 FBXO30Q8TB52 745 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 OR5P2Q8WZ92 322 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 GTF2H4Q92759 462 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 EQTNQ9NQ60 294 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 FAM120CQ9NX05 1096 aaKnown RBP12.66□□□□□ -0.38
NEK3-210ENST00000620675 FREM3P0C091 2139 aa12.66□□□□□ -0.38
NEK3-210ENST00000620675 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 LOC100653049A0A140TA62 436 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 FBP2O00757 339 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 KRT34O76011 436 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 F10P00742 488 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 IL6P05231 212 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 PTPN6P29350 595 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 CLCN2P51788 898 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 PRKAG1P54619 331 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 KCNK10P57789 538 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 RNF4P78317 190 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 MLC1Q15049 377 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 LINC00303Q3SY05 128 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 TCTN3Q6NUS6 607 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 RNF111Q6ZNA4 994 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 APLFQ8IW19 511 aaPredicted RBP12.65□□□□□ -0.38
NEK3-210ENST00000620675 OR2L13Q8N349 312 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 PSMA8Q8TAA3 256 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 APOBEC4Q8WW27 367 aaKnown RBP12.65□□□□□ -0.38
NEK3-210ENST00000620675 GIMAP5Q96F15 307 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 AURKBQ96GD4 344 aaPredicted RBP12.65□□□□□ -0.38
NEK3-210ENST00000620675 C16orf58Q96GQ5 468 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 CCDC115Q96NT0 180 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 LMF1Q96S06 567 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 YIPF4Q9BSR8 244 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 TAS2R9Q9NYW1 312 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 MAPRE3Q9UPY8 281 aa12.65□□□□□ -0.38
NEK3-210ENST00000620675 CCDC154A6NI56 674 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 WWP2O00308 870 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 PLOD2O00469 737 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 NDUFAB1O14561 156 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 PSMG1O95456 288 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 PDGFAP04085 211 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 SOAT1P35610 550 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 RRADP55042 308 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 CORO7P57737 925 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 RPS26P62854 115 aaKnown RBP12.65□□□□□ -0.39
NEK3-210ENST00000620675 CBX1P83916 185 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 EBPQ15125 230 aaKnown RBP12.65□□□□□ -0.39
NEK3-210ENST00000620675 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.39
NEK3-210ENST00000620675 BORAQ6PGQ7 559 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 TMEM64Q6YI46 380 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 HSDL2Q6YN16 418 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 SNX32Q86XE0 403 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 ZFP28Q8NHY6 868 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 GAL3ST4Q96RP7 486 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 ITPAQ9BY32 194 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 DEFB126Q9BYW3 111 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 TRIM8Q9BZR9 551 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 LHPPQ9H008 270 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 ZNF552Q9H707 407 aaPredicted RBP12.65□□□□□ -0.39
NEK3-210ENST00000620675 DDX18Q9NVP1 670 aaKnown RBP12.65□□□□□ -0.39
NEK3-210ENST00000620675 GPR83Q9NYM4 423 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 COPS7AQ9UBW8 275 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 C19orf53Q9UNZ5 99 aaPredicted RBP12.65□□□□□ -0.39
NEK3-210ENST00000620675 CAPN7Q9Y6W3 813 aa12.65□□□□□ -0.39
NEK3-210ENST00000620675 FAM87AP0C7U9 286 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 CCT3P49368 545 aaKnown RBP12.64□□□□□ -0.39
NEK3-210ENST00000620675 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 ZNF468Q5VIY5 522 aaPredicted RBP12.64□□□□□ -0.39
NEK3-210ENST00000620675 GPR155Q7Z3F1 870 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 MSRB3Q8IXL7 192 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 NUP43Q8NFH3 380 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 PANX1Q96RD7 426 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 WWTR1Q9GZV5 400 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 SERHL2Q9H4I8 314 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 CDCP1Q9H5V8 836 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 ZCCHC3Q9NUD5 404 aaKnown RBP12.64□□□□□ -0.39
NEK3-210ENST00000620675 BTNL2Q9UIR0 455 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 HEMK1Q9Y5R4 338 aaPredicted RBP12.64□□□□□ -0.39
NEK3-210ENST00000620675 COL6A6A6NMZ7 2263 aa12.64□□□□□ -0.39
NEK3-210ENST00000620675 CAPN14A8MX76 684 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 CEACAM4O75871 244 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 HOXB9P17482 250 aaPredicted RBP12.63□□□□□ -0.39
NEK3-210ENST00000620675 POLE2P56282 527 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms