RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 EXO5Q9H790 373 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 SPRR3Q9UBC9 169 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 BCAP29Q9UHQ4 241 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 ZNF639Q9UID6 485 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 DLGAP4Q9Y2H0 992 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 FAM215AQ9Y5M1 114 aa15.76■□□□□ 0.11
HMGN3-203ENST00000620514 MYO9AB2RTY4 2548 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 LRBAP50851 2863 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 TRGV5A0A0B4J1U4 118 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 SMIM23A6NLE4 172 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 FAM90A27PA6NNH2 459 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 TP53I11O14683 189 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 PCDH7O60245 1069 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 SUSD5O60279 629 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 HCN1O60741 890 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 GLRA3O75311 464 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 TRIM3O75382 744 aaPredicted RBP15.75■□□□□ 0.11
HMGN3-203ENST00000620514 CBX7O95931 251 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 PROCP04070 461 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 ENO1P06733 434 aaKnown RBP15.75■□□□□ 0.11
HMGN3-203ENST00000620514 MYL2P10916 166 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 ACVR2AP27037 513 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 TRPC1P48995 793 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 BTKQ06187 659 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 TRMT12Q53H54 448 aaKnown RBP15.75■□□□□ 0.11
HMGN3-203ENST00000620514 DESI1Q6ICB0 168 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 RTL6Q6ICC9 239 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 ZYG11AQ6WRX3 759 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 GDF7Q7Z4P5 450 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 GBP7Q8N8V2 638 aaPredicted RBP15.75■□□□□ 0.11
HMGN3-203ENST00000620514 EBPLQ9BY08 206 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 UCK2Q9BZX2 261 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 MID1IP1Q9NPA3 183 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 UTS2RQ9UKP6 389 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 ACAD8Q9UKU7 415 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 PSME2Q9UL46 239 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 STK38LQ9Y2H1 464 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 FBN2P35556 2912 aa15.75■□□□□ 0.11
HMGN3-203ENST00000620514 NKX2-6A6NCS4 301 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 CAPN14A8MX76 684 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 PCSK2P16519 638 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 ABCD3P28288 659 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 NRG3P56975 720 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 MRPS35P82673 323 aaKnown RBP15.74■□□□□ 0.11
HMGN3-203ENST00000620514 EIF1ADQ8N9N8 165 aaKnown RBP15.74■□□□□ 0.11
HMGN3-203ENST00000620514 C17orf47Q8NEP4 570 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 OR52R1Q8NGF1 315 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 LILRB4Q8NHJ6 448 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 EPS8L3Q8TE67 593 aaKnown RBP15.74■□□□□ 0.11
HMGN3-203ENST00000620514 C16orf78Q8WTQ4 265 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 ASB5Q8WWX0 329 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 EXOSC8Q96B26 276 aaKnown RBP15.74■□□□□ 0.11
HMGN3-203ENST00000620514 SARAFQ96BY9 339 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 CTHRC1Q96CG8 243 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 ZNF597Q96LX8 424 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 RILPQ96NA2 401 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 TTYH2Q9BSA4 534 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 ANGPTL4Q9BY76 406 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 ANKRA2Q9H9E1 313 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 L2HGDHQ9H9P8 463 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 PFDN4Q9NQP4 134 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 RYDENQ9NUL5 291 aaKnown RBP15.74■□□□□ 0.11
HMGN3-203ENST00000620514 PLLPQ9Y342 182 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 ZNF780BQ9Y6R6 833 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 APCP25054 2843 aa15.74■□□□□ 0.11
HMGN3-203ENST00000620514 PHF3Q92576 2039 aaKnown RBP15.73■□□□□ 0.11
HMGN3-203ENST00000620514 GNG14A0A1W2PPG7 69 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ANKRD33BA6NCL7 494 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 FIGNL2A6NMB9 653 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 PLIN3O60664 434 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 NME6O75414 186 aaPredicted RBP15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ABCB1P08183 1280 aaPredicted RBP15.73■□□□□ 0.11
HMGN3-203ENST00000620514 GLI4P10075 376 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 KRT15P19012 456 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 GDF1P27539 372 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 CHRNB4P30926 498 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 TIA1P31483 386 aaKnown RBP eCLIP15.73■□□□□ 0.11
HMGN3-203ENST00000620514 CASP3P42574 277 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 TMED10P49755 219 aaKnown RBP15.73■□□□□ 0.11
HMGN3-203ENST00000620514 NAGLUP54802 743 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ACSM2AQ08AH3 577 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 SPIN4Q56A73 249 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 TBCELQ5QJ74 424 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 WLSQ5T9L3 541 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 FNDC7Q5VTL7 733 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 TMEM198Q66K66 360 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ACSM2BQ68CK6 577 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ACAD11Q709F0 780 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 CCDC116Q8IYX3 515 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ACBD4Q8NC06 268 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 C11orf24Q96F05 449 aaPredicted RBP15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ENKD1Q9H0I2 346 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 TNFRSF12AQ9NP84 129 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ACKR4Q9NPB9 350 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 QPCTLQ9NXS2 382 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 ALKBH4Q9NXW9 302 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 CSMD1Q96PZ7 3565 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 EXPH5Q8NEV8 1989 aa15.73■□□□□ 0.11
HMGN3-203ENST00000620514 PPM1BO75688 479 aa15.72■□□□□ 0.11
HMGN3-203ENST00000620514 DRD2P14416 443 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms