RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CNIH3Q8TBE1 160 aa17.88■□□□□ 0.45
PSPC1-206ENST00000619300 ALPK1Q96QP1 1244 aa17.88■□□□□ 0.45
PSPC1-206ENST00000619300 POLR1BQ9H9Y6 1135 aa17.88■□□□□ 0.45
PSPC1-206ENST00000619300 NMNAT1Q9HAN9 279 aaPredicted RBP17.88■□□□□ 0.45
PSPC1-206ENST00000619300 POFUT2Q9Y2G5 429 aa17.88■□□□□ 0.45
PSPC1-206ENST00000619300 COMMD3-BMI1R4GMX3 469 aa17.88■□□□□ 0.45
PSPC1-206ENST00000619300 SLC1A7O00341 560 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 SEMA7AO75326 666 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 CCDC159P0C7I6 412 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 BCKDHBP21953 392 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 CSNK1EP49674 416 aaKnown RBP17.87■□□□□ 0.45
PSPC1-206ENST00000619300 DEFB110Q30KQ9 67 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 OGFOD3Q6PK18 319 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 CA13Q8N1Q1 262 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 OR2L13Q8N349 312 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 DNAJC22Q8N4W6 341 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 OR4D11Q8NGI4 311 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 VANGL1Q8TAA9 524 aaPredicted RBP17.87■□□□□ 0.45
PSPC1-206ENST00000619300 TANKQ92844 425 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 HRASLS5Q96KN8 279 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 TRNT1Q96Q11 434 aaKnown RBP17.87■□□□□ 0.45
PSPC1-206ENST00000619300 MAP3K3Q99759 626 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 NIPSNAP1Q9BPW8 284 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 ZNF556Q9HAH1 456 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 GIN1Q9NXP7 522 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 PTGFRNQ9P2B2 879 aa17.87■□□□□ 0.45
PSPC1-206ENST00000619300 ARRDC5A6NEK1 342 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 DUXAA6NLW8 204 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 SGK494L7N484 410 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 SRPX2O60687 465 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ABCB7O75027 752 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 GPR75O95800 540 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 CTSBP07858 339 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 SHC2P98077 582 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 PMS2P3Q13401 168 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 DEFB133Q30KQ1 61 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ATAD3BQ5T9A4 648 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 MFSD12Q6NUT3 480 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 FAM111BQ6SJ93 734 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 RBM45Q8IUH3 476 aaKnown RBP17.86■□□□□ 0.45
PSPC1-206ENST00000619300 SHISA5Q8N114 240 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ARHGEF39Q8N4T4 335 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 BPIFB6Q8NFQ5 453 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 OR9Q2Q8NGE9 314 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ADAMTS15Q8TE58 950 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ZNF566Q969W8 418 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 SLC35A4Q96G79 324 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 TCTN2Q96GX1 697 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 MS4A4EQ96PG1 132 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 WFDC6Q9BQY6 131 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 CALML5Q9NZT1 146 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 FAM227AF5H4B4 570 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 K7ESF4 209 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 NME6O75414 186 aaPredicted RBP17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ANGPTL1O95841 491 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ID2Q02363 134 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 DEF8Q6ZN54 512 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 COMTD1Q86VU5 262 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 LACC1Q8IV20 430 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 TAGAPQ8N103 731 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 TMEM52Q8NDY8 209 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 DNASE2BQ8WZ79 361 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ANKHQ9HCJ1 492 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 RSL24D1Q9UHA3 163 aaKnown RBP17.86■□□□□ 0.45
PSPC1-206ENST00000619300 ACAD8Q9UKU7 415 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 SIT1Q9Y3P8 196 aa17.86■□□□□ 0.45
PSPC1-206ENST00000619300 FGF17O60258 216 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 LDB3O75112 727 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 LGI1O95970 557 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 ATP1B1P05026 303 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 DCNP07585 359 aaKnown RBP17.85■□□□□ 0.45
PSPC1-206ENST00000619300 CBLP22681 906 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 CXCR4P61073 352 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 PRTGQ2VWP7 1150 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 ZNF628Q5EBL2 1059 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 CDC73Q6P1J9 531 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 FAM92BQ6ZTR7 304 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 CCDC71Q8IV32 467 aaPredicted RBP17.85■□□□□ 0.45
PSPC1-206ENST00000619300 SLC16A11Q8NCK7 471 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 SGCDQ92629 289 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 DHRS1Q96LJ7 313 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 PINK1Q9BXM7 581 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 SLC38A1Q9H2H9 487 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 TMCC3Q9ULS5 477 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 CLCA2Q9UQC9 943 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 SLC9A8Q9Y2E8 581 aa17.85■□□□□ 0.45
PSPC1-206ENST00000619300 CASC3O15234 703 aaKnown RBP17.84■□□□□ 0.45
PSPC1-206ENST00000619300 SDC3O75056 442 aa17.84■□□□□ 0.45
PSPC1-206ENST00000619300 AGR2O95994 175 aa17.84■□□□□ 0.45
PSPC1-206ENST00000619300 H1F0P07305 194 aaKnown RBP17.84■□□□□ 0.45
PSPC1-206ENST00000619300 JUNBP17275 347 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-206ENST00000619300 CALRP27797 417 aaKnown RBP17.84■□□□□ 0.45
PSPC1-206ENST00000619300 TTKP33981 857 aa17.84■□□□□ 0.45
PSPC1-206ENST00000619300 SOX18P35713 384 aa17.84■□□□□ 0.45
PSPC1-206ENST00000619300 RAB38P57729 211 aa17.84■□□□□ 0.45
PSPC1-206ENST00000619300 SMIM11AP58511 58 aa17.84■□□□□ 0.45
PSPC1-206ENST00000619300 CHRNEQ04844 493 aa17.84■□□□□ 0.45
PSPC1-206ENST00000619300 FOXD4Q12950 439 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-206ENST00000619300 MAD2L1BPQ15013 274 aaPredicted RBP17.84■□□□□ 0.45
PSPC1-206ENST00000619300 FAM214AQ32MH5 1076 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms