RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SLC7A13Q8TCU3 470 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 TOE1Q96GM8 510 aaKnown RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 MSLNLQ96KJ4 702 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 PITX2Q99697 317 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ZNF226Q9NYT6 803 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ZNF780BQ9Y6R6 833 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 MAGEB3O15480 346 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 PROM1O43490 865 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 SERPINB7O75635 380 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 JUNDP17535 347 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 CPN2P22792 545 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ELAVL4P26378 380 aaKnown RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 AKT2P31751 481 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 MPIP34949 423 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 KCNJ5P48544 419 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 SRSF5Q13243 272 aaKnown RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 TUBA3CQ13748 450 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 USP30Q70CQ3 517 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 TAF8Q7Z7C8 310 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 PAQR7Q86WK9 346 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 IQCF1Q8N6M8 205 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 OR5T3Q8NGG3 340 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 FAM3CQ92520 227 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ZNF566Q969W8 418 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 SCARF2Q96GP6 870 aaPredicted RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 ZNF354BQ96LW1 612 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 OR2A14Q96R47 310 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 PHOX2BQ99453 314 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 MS4A12Q9NXJ0 267 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ANKMY1Q9P2S6 941 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 MKLN1Q9UL63 735 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 CACNA1IQ9P0X4 2223 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ASXL3Q9C0F0 2248 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 CLDN24A6NM45 220 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 KDM1AO60341 852 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 H1F0P07305 194 aaKnown RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 RFX3P48380 749 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 CRISP3P54108 245 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 EMP3P54852 163 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 KIAA1024LP59773 190 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ARPC4P59998 168 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 CHRNEQ04844 493 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 RGS1Q08116 209 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 MRM1Q6IN84 353 aaKnown RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 FIGLAQ6QHK4 219 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 PTCHD4Q6ZW05 846 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 VRK2Q86Y07 508 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 STX19Q8N4C7 294 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 GGHQ92820 318 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 FAM131CQ96AQ9 280 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 GAS2L1Q99501 681 aaPredicted RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 RBCK1Q9BYM8 510 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 GIMAP4Q9NUV9 329 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 HRASLS2Q9NWW9 162 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 TAS2R7Q9NYW3 318 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ACTR10Q9NZ32 417 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 ENPP5Q9UJA9 477 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 SCML1Q9UN30 329 aa11.68□□□□□ -0.54
CIITA-212ENST00000618207 WBP11Q9Y2W2 641 aaKnown RBP11.68□□□□□ -0.54
CIITA-212ENST00000618207 VPS13AQ96RL7 3174 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 FCMRO60667 390 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 TBX19O60806 448 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 PDE9AO76083 593 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 NR2F6P10588 404 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 DDX5P17844 614 aaKnown RBP11.67□□□□□ -0.54
CIITA-212ENST00000618207 AVPR1BP47901 424 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 LSSP48449 732 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 ST13P50502 369 aaKnown RBP11.67□□□□□ -0.54
CIITA-212ENST00000618207 XKP51811 444 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 MRPS21P82921 87 aaKnown RBP11.67□□□□□ -0.54
CIITA-212ENST00000618207 CTF1Q16619 201 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 FAM111BQ6SJ93 734 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 KRT73Q86Y46 540 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 ALDH16A1Q8IZ83 802 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 SLC16A11Q8NCK7 471 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 RHOXF1Q8NHV9 184 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 APOBEC4Q8WW27 367 aaKnown RBP11.67□□□□□ -0.54
CIITA-212ENST00000618207 ABTB1Q969K4 478 aaPredicted RBP11.67□□□□□ -0.54
CIITA-212ENST00000618207 OR7D2Q96RA2 312 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 TMEM9Q9P0T7 183 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 NTNG1Q9Y2I2 539 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 NAALAD2Q9Y3Q0 740 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 HSPE1-MOB4S4R3N1 261 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 SPAG17Q6Q759 2223 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 HCRTR1O43613 425 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 KCNJ13O60928 360 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 GUCY1B2O75343 617 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 UGT2B17O75795 530 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 CTSBP07858 339 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 CD36P16671 472 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 CBLP22681 906 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 KHKP50053 298 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 CRISP1P54107 249 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 TRA2BP62995 288 aaKnown RBP11.67□□□□□ -0.54
CIITA-212ENST00000618207 MLLT1Q03111 559 aaPredicted RBP11.67□□□□□ -0.54
CIITA-212ENST00000618207 ST3GAL4Q11206 333 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 RUNX2Q13950 521 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 EOGTQ5NDL2 527 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 CCNJQ5T5M9 372 aa11.67□□□□□ -0.54
CIITA-212ENST00000618207 P2RY8Q86VZ1 359 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms