RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	CLEC2D	Q9UHP7	191 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RFXAP	O00287	272 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NTN1	O95631	604 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	GRK3	P35626	688 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SOX3	P41225	446 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	HMGA2	P52926	109 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OXA1L	Q15070	435 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	GPAT3	Q53EU6	434 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	C18orf63	Q68DL7	685 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR7G1	Q8NGA0	311 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR2A1	Q8NGT9	310 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC7A13	Q8TCU3	470 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DOK4	Q8TEW6	326 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	C16orf58	Q96GQ5	468 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZNF607	Q96SK3	696 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MGLL	Q99685	303 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	BCL7B	Q9BQE9	202 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NEURL2	Q9BR09	285 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MRPS30	Q9NP92	439 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FBXO8	Q9NRD0	319 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SACM1L	Q9NTJ5	587 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FTSJ1	Q9UET6	329 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DPP7	Q9UHL4	492 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZFR2	Q9UPR6	939 aa	Known RBP	13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CAB39	Q9Y376	341 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	AP1M2	Q9Y6Q5	423 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ANKRD34B	A5PLL1	514 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZAR1L	A6NP61	321 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	AGRP	O00253	132 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	BCL6	P41182	706 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	XK	P51811	444 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TMEM107	Q6UX40	140 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CASP12	Q6UXS9	341 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FAM46D	Q8NEK8	389 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	QRFPR	Q96P65	431 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MAPKAP1	Q9BPZ7	522 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	WASH6P	Q9NQA3	447 aa		13.12	□□□□□ -0.31
CACNA1C-231	ENST00000616390	LRIT2	A6NDA9	550 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DSCR3	O14972	297 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	NARS	O43776	548 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	UGT2B17	O75795	530 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SEMA3D	O95025	777 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CFL1	P23528	166 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CBX5	P45973	191 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DUSP2	Q05923	314 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PRDX1	Q06830	199 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ELOA	Q14241	798 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ARHGAP19	Q14CB8	494 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	INAVA	Q3KP66	663 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	USP43	Q70EL4	1123 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC51B	Q86UW2	128 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RAB42	Q8N4Z0	105 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FBXL6	Q8N531	539 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC22A8	Q8TCC7	542 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	COL26A1	Q96A83	441 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RAB7B	Q96AH8	199 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ZNF354B	Q96LW1	612 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	AMDHD1	Q96NU7	426 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	RPP25	Q9BUL9	199 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MRO	Q9BYG7	248 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	A4GALT	Q9NPC4	353 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SLC35C2	Q9NQQ7	365 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FBXL12	Q9NXK8	326 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SPHK1	Q9NYA1	384 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ATG4B	Q9Y4P1	393 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KCNE3	Q9Y6H6	103 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	SPEG	Q15772	3267 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR5K4	A6NMS3	321 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	WWP2	O00308	870 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	MRPS14	O60783	128 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	EN2	P19622	333 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CERS1	P27544	350 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	GDI1	P31150	447 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	UGT2B15	P54855	530 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KIAA1211L	Q6NV74	962 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	PAQR6	Q6TCH4	344 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OR52E1	Q8NGJ3	308 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	INTS12	Q96CB8	462 aa	Known RBP	13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CNPPD1	Q9BV87	410 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	FNDC11	Q9BVV2	318 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	P2RX2	Q9UBL9	471 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	DOCK8	Q8NF50	2099 aa		13.11	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3D	A0A087WVF3	549 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3I	A0A087WXS9	549 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3E	A0A087X179	549 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3K	A0A087X1G2	549 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ISM1	B1AKI9	464 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3L	B9A6J9	549 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TLX2	O43763	284 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KIAA0513	O60268	411 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	HMGN2	P05204	90 aa	Known RBP	13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	TBC1D3H	P0C7X1	549 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	ERG	P11308	486 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	OSM	P13725	252 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	CD40LG	P29965	261 aa		13.1	□□□□□ -0.31
CACNA1C-231	ENST00000616390	KCNJ5	P48544	419 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms