RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 TAS2R50P59544 299 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 TSPAN5P62079 268 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 PTSQ03393 145 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 HSF2Q03933 536 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 HSPB3Q12988 150 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 ADAM15Q13444 863 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 VEZF1Q14119 521 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 LGALSLQ3ZCW2 172 aaPredicted RBP12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 GCNT6Q5T4J0 391 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 RAET1GQ6H3X3 334 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 C17orf99Q6UX52 265 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 RTL4Q6ZR62 310 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 GPR155Q7Z3F1 870 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 RBM45Q8IUH3 476 aaKnown RBP12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 FAM9CQ8IZT9 166 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 MS4A15Q8N5U1 240 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 OR51J1Q9H342 316 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 CPNE7Q9UBL6 633 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 ZFR2Q9UPR6 939 aaKnown RBP12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 RANBP2P49792 3224 aaKnown RBP12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 TCRBV16S1A1N1A0A5B0 115 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 H7C4K7 107 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 ATP1B2P14415 290 aaPredicted RBP12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 KIAA1024LP59773 190 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 SLC5A12Q1EHB4 618 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 RNF180Q86T96 592 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 SAMD12Q8N8I0 201 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 PROKR2Q8NFJ6 384 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 CYB5D2Q8WUJ1 264 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 UFD1Q92890 307 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 YIPF4Q9BSR8 244 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 THAP7Q9BT49 309 aaPredicted RBP12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 FOLH1BQ9HBA9 442 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 DOCK6Q96HP0 2047 aa12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 DICER1Q9UPY3 1922 aaKnown RBP12.7□□□□□ -0.38
PCDHA11-202ENST00000616325 ARHGEF33A8MVX0 844 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 FZD6O60353 706 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 NME6O75414 186 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 SEMG1P04279 462 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 BCHEP06276 602 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 HOXD4P09016 255 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 PFN3P60673 137 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ERVK-21P61565 698 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 MLLT11Q13015 90 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 DCST1Q5T197 706 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 C19orf48Q6RUI8 117 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ALKAL2Q6UX46 152 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 TRMT11Q7Z4G4 463 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 KIAA0907Q7Z7F0 614 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 LIX1LQ8IVB5 337 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 CLDN22Q8N7P3 220 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 OR2AP1Q8NGE2 309 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ASZ1Q8WWH4 475 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 MSLNLQ96KJ4 702 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 TBX5Q99593 518 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 RUVBL1Q9Y265 456 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 SESN1Q9Y6P5 492 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ZAR1LA6NP61 321 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 NEDD8-MDP1E9PL57 170 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 DVL2O14641 736 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 PRKYO43930 277 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ACSM4P0C7M7 580 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 HMGA1P17096 107 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ELK1P19419 428 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 EVX1P49640 407 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 DEFA5Q01523 94 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 GINS1Q14691 196 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 TEAD4Q15561 434 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ZNF628Q5EBL2 1059 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 NDUFAF5Q5TEU4 345 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 KIAA1161Q6NSJ0 714 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 MACC1Q6ZN28 852 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 TRILQ7L0X0 811 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 LRRC70Q7Z2Q7 622 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 TRAPPC5Q8IUR0 188 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 DUSP18Q8NEJ0 188 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 HMGB4Q8WW32 186 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 NEIL2Q969S2 332 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 PLD4Q96BZ4 506 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 PPCDCQ96CD2 204 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 IL17FQ96PD4 163 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 RIOK2Q9BVS4 552 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 IFT46Q9NQC8 304 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 ABT1Q9ULW3 272 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 HRH3Q9Y5N1 445 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 PRR23D1E9PI22 279 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 SCAMP2O15127 329 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 PPM1BO75688 479 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 TPOP07202 933 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 PRR23D2P0DMB1 279 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 JUPP14923 745 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 RECQLP46063 649 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 CTSCP53634 463 aa12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
PCDHA11-202ENST00000616325 CNTN1Q12860 1018 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms