RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 HS3ST3A1Q9Y663 406 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 WDFY4Q6ZS81 3184 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 CCDC163A0A0D9SF12 145 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 FAM220BPB1ANY3 271 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 SH3BP5O60239 455 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 GMDSO60547 372 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 ERN1O75460 977 aaKnown RBP12.39□□□□□ -0.43
FOXN3-219ENST00000615335 TP53P04637 393 aaPredicted RBP12.39□□□□□ -0.43
FOXN3-219ENST00000615335 CLEC2LP0C7M8 214 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 EPB42P16452 691 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 EFNA1P20827 205 aaPredicted RBP12.39□□□□□ -0.43
FOXN3-219ENST00000615335 BCKDHBP21953 392 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 LIPAP38571 399 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 RAPSNQ13702 412 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 HKDC1Q2TB90 917 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 TTLL9Q3SXZ7 439 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 SLC46A3Q7Z3Q1 461 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 TMEFF1Q8IYR6 380 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 DNAJB8Q8NHS0 232 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 CLHC1Q8NHS4 586 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 RBPMSQ93062 196 aaKnown RBP12.39□□□□□ -0.43
FOXN3-219ENST00000615335 PELOQ9BRX2 385 aaKnown RBP12.39□□□□□ -0.43
FOXN3-219ENST00000615335 CCM2Q9BSQ5 444 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 RAB23Q9ULC3 237 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 GPR34Q9UPC5 381 aa12.39□□□□□ -0.43
FOXN3-219ENST00000615335 PLXND1Q9Y4D7 1925 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 TRBV5-3A0A0A0MS03 114 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 CIB4A0PJX0 185 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 KPNA5O15131 536 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 IFNA7P01567 189 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 LCKP06239 509 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 BCKDHAP12694 445 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 HOXB6P17509 224 aaKnown RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 AOAHP28039 575 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 DCTP40126 519 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 CCT3P49368 545 aaKnown RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 PPP1R8Q12972 351 aaKnown RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 ELOAQ14241 798 aaKnown RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 GPR19Q15760 415 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 COL28A1Q2UY09 1125 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 FAM209BQ5JX69 171 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 SLC35F1Q5T1Q4 408 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 CAPN13Q6MZZ7 669 aaPredicted RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 Q6ZSR6 202 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 ZNF547Q8IVP9 402 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 DTWD2Q8NBA8 298 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 USP7Q93009 1102 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 PYCR2Q96C36 320 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 MTFMTQ96DP5 389 aaKnown RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 FAM120BQ96EK7 910 aaKnown RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 HSPA12BQ96MM6 686 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 SLC29A3Q9BZD2 475 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 PCED1AQ9H1Q7 454 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 LATS2Q9NRM7 1088 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 PCDHB14Q9Y5E9 798 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 U3KQV3 271 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 SERPINA1P01009 418 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 BTF3P20290 206 aaKnown RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 ALAS2P22557 587 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 PRKACGP22612 351 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 TNFSF8P32971 234 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 PFN3P60673 137 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 TBCEQ15813 527 aaPredicted RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 SYT16Q17RD7 645 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 SYTL3Q4VX76 610 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 ENPP7Q6UWV6 458 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 TMEM179BQ7Z7N9 219 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 LRRTM4Q86VH4 590 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 CALHM3Q86XJ0 350 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 HIPK1Q86Z02 1210 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 MAML2Q8IZL2 1156 aaPredicted RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 SKA2Q8WVK7 121 aaPredicted RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 ASZ1Q8WWH4 475 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 KLHL15Q96M94 604 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 SIGLEC11Q96RL6 698 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 CPPED1Q9BRF8 314 aaPredicted RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 KCNH6Q9H252 994 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 EXD2Q9NVH0 621 aa12.38□□□□□ -0.43
FOXN3-219ENST00000615335 PCYT1BQ9Y5K3 369 aaPredicted RBP12.38□□□□□ -0.43
FOXN3-219ENST00000615335 THADAQ6YHU6 1953 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 A0A096LPI6 279 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 A0A1W2PQ09 198 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 TUBAL3A6NHL2 446 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 SEC14L5O43304 696 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 PROM1O43490 865 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 LILRB5O75023 590 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 TSC22D2O75157 780 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 STK16O75716 305 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 POP7O75817 140 aaKnown RBP12.37□□□□□ -0.43
FOXN3-219ENST00000615335 APOC1P02654 83 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 CEACAM5P06731 702 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 CD27P26842 260 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 S100A3P33764 101 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 RAB14P61106 215 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 YPEL5P62699 121 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 NFATC4Q14934 902 aa12.37□□□□□ -0.43
FOXN3-219ENST00000615335 TIGD6Q17RP2 521 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms