RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 SLC25A25Q6KCM7 469 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 ANKRD46Q86W74 232 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 SIAH3Q8IW03 269 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 GALNT12Q8IXK2 581 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 TANKQ92844 425 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 C16orf58Q96GQ5 468 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 FBXL20Q96IG2 436 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 PHF12Q96QT6 1004 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 ROPN1BQ9BZX4 212 aaPredicted RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 ROPN1Q9HAT0 212 aaPredicted RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 BRF2Q9HAW0 419 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 TMBIM4Q9HC24 238 aa5.25□□□□□ -1.57
CPNE3-208ENST00000614678 TUBA8Q9NY65 449 aaPredicted RBP5.25□□□□□ -1.57
CPNE3-208ENST00000614678 A0A088AWK7 358 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TRAV17A0A0B4J275 112 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 NPIPB8E9PQR5 432 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PEX1O43933 1283 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 NME2P1O60361 137 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 UGT2B11O75310 529 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SEMA3DO95025 777 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 IGKV1D-16P01601 117 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SLC35E2P0CK97 266 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 UROSP10746 265 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 G6PDP11413 515 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF10P21506 573 aaPredicted RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 GPX3P22352 226 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 NME2P22392 152 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 GSTM2P28161 218 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TSFMP43897 325 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TRPC1P48995 793 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PKNOX1P55347 436 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TGM3Q08188 693 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 FUT7Q11130 342 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 UBAP2LQ14157 1087 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF791Q3KP31 576 aaPredicted RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF628Q5EBL2 1059 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 EMC4Q5J8M3 183 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CCNJQ5T5M9 372 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 OR52E8Q6IFG1 317 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 LIX1Q8N485 282 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF441Q8N8Z8 693 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 OR5AK3PQ8NH89 298 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PIK3R3Q92569 461 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 DAZLQ92904 295 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CTHRC1Q96CG8 243 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SEC16BQ96JE7 1060 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 LRTM1Q9HBL6 345 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PFDN4Q9NQP4 134 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 MKS1Q9NXB0 559 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PHF11Q9UIL8 331 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 MCM8Q9UJA3 840 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 GXYLT2A0PJZ3 443 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 A8MVJ9 347 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SHISA8B8ZZ34 492 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 UPK1AO00322 258 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 AGFG2O95081 481 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ALDOCP09972 364 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CT45A8P0DMV1 189 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CT45A9P0DMV2 189 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ABCD3P28288 659 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 EPHA3P29320 983 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 HLCSP50747 726 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SSR4P51571 173 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PRKAG1P54619 331 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CT45A2Q5DJT8 189 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 C6orf136Q5SQH8 315 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 DCST1Q5T197 706 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 METTL2BQ6P1Q9 378 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CLECL1Q8IZS7 167 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 VWA5B2Q8N398 1253 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 MARVELD2Q8N4S9 558 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ASB15Q8WXK1 588 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TLCD1Q96CP7 247 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CENPKQ9BS16 269 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SLC29A3Q9BZD2 475 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SLC35C2Q9NQQ7 365 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 HPF1Q9NWY4 346 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF639Q9UID6 485 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 HEATR5AQ86XA9 2040 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 OTOGQ6ZRI0 2925 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 NPIPA5A0A0B4J1W7 369 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 C2orf92A0A1B0GVN3 265 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 LRRC3CA6NJW4 275 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 NPIPA7E9PJI5 369 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 H0YC42 278 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ADAM10O14672 748 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ABCB1P08183 1280 aaPredicted RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SNRPB2P08579 225 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 NPIPA8P0DM63 369 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TLX1P31314 330 aaPredicted RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SLC1A6P48664 564 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 NCBP2P52298 156 aaKnown RBP eCLIP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 TPD52P55327 224 aaPredicted RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 SKP1P63208 163 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 PSG6Q00889 435 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 CSTF3Q12996 717 aaKnown RBP5.24□□□□□ -1.57
CPNE3-208ENST00000614678 XKR7Q5GH72 579 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 FHL5Q5TD97 284 aa5.24□□□□□ -1.57
CPNE3-208ENST00000614678 ZNF787Q6DD87 383 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms