RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 TMEM64Q6YI46 380 aa20.87■□□□□ 0.93
FAM228B-208ENST00000613899 LIX1Q8N485 282 aa20.87■□□□□ 0.93
FAM228B-208ENST00000613899 EIF1ADQ8N9N8 165 aaKnown RBP20.87■□□□□ 0.93
FAM228B-208ENST00000613899 SPPL2AQ8TCT8 520 aa20.87■□□□□ 0.93
FAM228B-208ENST00000613899 MZB1Q8WU39 189 aa20.87■□□□□ 0.93
FAM228B-208ENST00000613899 CCDC126Q96EE4 140 aa20.87■□□□□ 0.93
FAM228B-208ENST00000613899 ACPTQ9BZG2 426 aa20.87■□□□□ 0.93
FAM228B-208ENST00000613899 TNFRSF10DQ9UBN6 386 aa20.87■□□□□ 0.93
FAM228B-208ENST00000613899 FAM90A27PA6NNH2 459 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 PCDH7O60245 1069 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 GLRA3O75311 464 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 TRIM3O75382 744 aaPredicted RBP20.86■□□□□ 0.93
FAM228B-208ENST00000613899 SNX4O95219 450 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 HOXD4P09016 255 aaPredicted RBP20.86■□□□□ 0.93
FAM228B-208ENST00000613899 GABRA1P14867 456 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 ENDOUP21128 410 aaKnown RBP20.86■□□□□ 0.93
FAM228B-208ENST00000613899 GDF1P27539 372 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 ACSM2AQ08AH3 577 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 FAM219BQ5XKK7 198 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 ACSM2BQ68CK6 577 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 MEX3BQ6ZN04 569 aaKnown RBP20.86■□□□□ 0.93
FAM228B-208ENST00000613899 GSPT2Q8IYD1 628 aaKnown RBP20.86■□□□□ 0.93
FAM228B-208ENST00000613899 NEIL3Q8TAT5 605 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 C14orf79Q96F83 325 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 RILPQ96NA2 401 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 TTYH2Q9BSA4 534 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 NXF5Q9H1B4 397 aaKnown RBP20.86■□□□□ 0.93
FAM228B-208ENST00000613899 SPRR3Q9UBC9 169 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 BCAP29Q9UHQ4 241 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 ZNF639Q9UID6 485 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 UTS2RQ9UKP6 389 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 PCDHGB3Q9Y5G1 929 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 FAM215AQ9Y5M1 114 aa20.86■□□□□ 0.93
FAM228B-208ENST00000613899 HCFC1P51610 2035 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 GNG14A0A1W2PPG7 69 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 FAM47E-STBD1D6RA91 191 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 CDH16O75309 829 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 DRD2P14416 443 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 ABCD3P28288 659 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 MASP1P48740 699 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 NAA20P61599 178 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 C1orf185Q5T7R7 199 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 FAM111BQ6SJ93 734 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 PACS2Q86VP3 889 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 CCDC71Q8IV32 467 aaPredicted RBP20.85■□□□□ 0.93
FAM228B-208ENST00000613899 PRR22Q8IZ63 422 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 SAMD14Q8IZD0 417 aaPredicted RBP20.85■□□□□ 0.93
FAM228B-208ENST00000613899 ZNF295-AS1Q8N0V1 137 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 OR10Q1Q8NGQ4 319 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 CTHRC1Q96CG8 243 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 HSPBAP1Q96EW2 488 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 CNRIP1Q96F85 164 aaPredicted RBP20.85■□□□□ 0.93
FAM228B-208ENST00000613899 TREX2Q9BQ50 279 aaPredicted RBP20.85■□□□□ 0.93
FAM228B-208ENST00000613899 ITPAQ9BY32 194 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 ANGPTL4Q9BY76 406 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 SLC6A15Q9H2J7 730 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 PPCSQ9HAB8 311 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 KCNJ16Q9NPI9 418 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 PFDN4Q9NQP4 134 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 PRODH2Q9UF12 536 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 DTX4Q9Y2E6 619 aa20.85■□□□□ 0.93
FAM228B-208ENST00000613899 DCHS2Q6V1P9 2916 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 ACOX3O15254 700 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 MYL2P10916 166 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 CHN1P15882 459 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 NAGAP17050 411 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 GSTM5P46439 218 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 HTR6P50406 440 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 DCAF7P61962 342 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 MGAT2Q10469 447 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 EXOSC7Q15024 291 aaKnown RBP20.84■□□□□ 0.93
FAM228B-208ENST00000613899 BICRALQ6AI39 1079 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 ADCY4Q8NFM4 1077 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 LURAP1Q96LR2 239 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 ZNF681Q96N22 645 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 GSTO2Q9H4Y5 243 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 DLGAP4Q9Y2H0 992 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 PLLPQ9Y342 182 aa20.84■□□□□ 0.93
FAM228B-208ENST00000613899 INTS1Q8N201 2190 aaKnown RBP20.84■□□□□ 0.93
FAM228B-208ENST00000613899 ARHGAP21Q5T5U3 1957 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 FREM3P0C091 2139 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 NKX2-6A6NCS4 301 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 H3BQF6 201 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 PPM1BO75688 479 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 CBX7O95931 251 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 IL3P08700 152 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 GLI4P10075 376 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 TIA1P31483 386 aaKnown RBP eCLIP20.83■□□□□ 0.93
FAM228B-208ENST00000613899 CASP3P42574 277 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 DUSP2Q05923 314 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 TFF3Q07654 80 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 HEPACAMQ14CZ8 416 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 NNATQ16517 81 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 RTL6Q6ICC9 239 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 ZYG11AQ6WRX3 759 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 CCNYL1Q8N7R7 359 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 OR52R1Q8NGF1 315 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 ZNF675Q8TD23 568 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 TMEM41AQ96HV5 264 aa20.83■□□□□ 0.93
FAM228B-208ENST00000613899 LCORQ96JN0 433 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms