RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ADRB3P13945 408 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 RAB13P51153 203 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 RPL23AP62750 156 aaKnown RBP8.4□□□□□ -1.07
TTC28-208ENST00000612946 PLA2G7Q13093 441 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 TEX26Q8N6G2 289 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 OR6S1Q8NH40 331 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 EXOSC8Q96B26 276 aaKnown RBP8.4□□□□□ -1.07
TTC28-208ENST00000612946 FAM163AQ96GL9 167 aaPredicted RBP8.4□□□□□ -1.07
TTC28-208ENST00000612946 C5orf34Q96MH7 638 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 MMP28Q9H239 520 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 IL26Q9NPH9 171 aa8.4□□□□□ -1.07
TTC28-208ENST00000612946 NLE1Q9NVX2 485 aaPredicted RBP8.4□□□□□ -1.07
TTC28-208ENST00000612946 HCKP08631 526 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 NUMBP49757 651 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SCAPQ12770 1279 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 CEACAM7Q14002 265 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 VEZF1Q14119 521 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 MTURNQ8N3F0 131 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 GRIN3AQ8TCU5 1115 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 NINJ1Q92982 152 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PLIN4Q96Q06 1357 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PTH2RP49190 550 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 TEKQ02763 1124 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ENPP2Q13822 863 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ZBTB37Q5TC79 503 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 IL34Q6ZMJ4 242 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SLC43A2Q8N370 569 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 TMEM68Q96MH6 324 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 TOLLIPQ9H0E2 274 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 RXFP3Q9NSD7 469 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 GAR1Q9NY12 217 aaKnown RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 COPS7AQ9UBW8 275 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 HNF1BP35680 557 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 KCNQ1P51787 676 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 UFM1P61960 85 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PCGF3Q3KNV8 242 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 RAET1GQ6H3X3 334 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 HCAR2Q8TDS4 363 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 HLA-CQ95604 372 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 FCRL2Q96LA5 508 aaPredicted RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 ZNF778Q96MU6 729 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 DHRS4Q9BTZ2 278 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 EBPLQ9BY08 206 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PCDHGA7Q9Y5G6 932 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 RAI2Q9Y5P3 530 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ZNF536O15090 1300 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 CKAP5Q14008 2032 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 C2orf92A0A1B0GVN3 265 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 NFKBIEO00221 500 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ANGPTL7O43827 346 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 MEOX2P50222 304 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 C4orf17Q53FE4 359 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 GGHQ92820 318 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PITHD1Q9GZP4 211 aaPredicted RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 SIX2Q9NPC8 291 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 GPR83Q9NYM4 423 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 MYEF2Q9P2K5 600 aaKnown RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 FBXL3Q9UKT7 428 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 CEP290O15078 2479 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 BTBD17A6NE02 478 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 MED6O75586 246 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 CMPK1P30085 196 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PPT1P50897 306 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 KLF1Q13351 362 aaPredicted RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 SGPP2Q8IWX5 399 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PSMB1P20618 241 aaKnown RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 LYSMD2Q8IV50 215 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 CADM3Q8N126 398 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 DCLRE1CQ96SD1 692 aaKnown RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 OSBPL2Q9H1P3 480 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 CWH43Q9H720 699 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 TRBV2A0A0J9YWF9 115 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SDHDO14521 159 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ARPC1BO15143 372 aaKnown RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 CLCN3P51790 818 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ZNF266Q14584 549 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 LRR1Q96L50 414 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SENP8Q96LD8 212 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 TRAV19A0A0A6YYK7 116 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 INSIG1O15503 277 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 B4GALT5O43286 388 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PMS2P2O95744 297 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 GRIK4Q16099 956 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 NOL9Q5SY16 702 aaKnown RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 LIPJQ5W064 366 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 WDR88Q6ZMY6 472 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 S100A7AQ86SG5 101 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 OR6C4Q8NGE1 309 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 IL31RAQ8NI17 732 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 PAQR8Q8TEZ7 354 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SLC5A11Q8WWX8 675 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 RLIMQ9NVW2 624 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ZNF586Q9NXT0 402 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 MAP10Q9P2G4 905 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SLC22A23A1A5C7 686 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 CLIC3O95833 236 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SYPP08247 313 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ZNF41P51814 821 aaPredicted RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 STC1P52823 247 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 INHBCP55103 352 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms