RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MAPK1P28482 360 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 SSR2P43308 183 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 RAB38P57729 211 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 OLR1P78380 273 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 MYBPC1Q00872 1141 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 CSTF3Q12996 717 aaKnown RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 ATP1A4Q13733 1029 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 RUNX2Q13950 521 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 ATP6AP1Q15904 470 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 MAPKAPK3Q16644 382 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 NRF1Q16656 503 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 MINDY4Q4G0A6 757 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 RUNDC3AQ59EK9 446 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 NHSL2Q5HYW2 709 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 SPANXN4Q5MJ08 99 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 LRIF1Q5T3J3 769 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 MFSD4BQ5TF39 518 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 GLYATQ6IB77 296 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 OR4C11Q6IEV9 310 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 QSOX2Q6ZRP7 698 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 MSANTD1Q6ZTZ1 278 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 IFNEQ86WN2 208 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 CARM1Q86X55 608 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 EPHX4Q8IUS5 362 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 TMEM151BQ8IW70 566 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 MSRB3Q8IXL7 192 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 RIMKLAQ8IXN7 391 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 OR52E4Q8NGH9 312 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 METTL21AQ8WXB1 218 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 PPWD1Q96BP3 646 aaKnown RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 TESCQ96BS2 214 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 METTL2AQ96IZ6 378 aaKnown RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 CIB1Q99828 191 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 SH3GL1Q99961 368 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 VN1R1Q9GZP7 353 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 GORASP2Q9H8Y8 452 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 LYRM4Q9HD34 91 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 P4HTMQ9NXG6 502 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 SLC25A37Q9NYZ2 338 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 C19orf25Q9UFG5 118 aaPredicted RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 DAPP1Q9UN19 280 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 PCDHGB4Q9UN71 923 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 USP22Q9UPT9 525 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 MRPS33Q9Y291 106 aaKnown RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 PCDHGB5Q9Y5G0 923 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 HS3ST3B1Q9Y662 390 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 SPACA6W5XKT8 324 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 CROCCQ5TZA2 2017 aa8.27□□□□□ -1.08
SMAD4-217ENST00000611848 A0A096LPI6 279 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 A0A1W2PQ72 361 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 SYNDIG1LA6NDD5 238 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ARGFXA6NJG6 315 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 SAP18O00422 153 aaKnown RBP8.27□□□□□ -1.09
SMAD4-217ENST00000611848 RTCAO00442 366 aaKnown RBP8.27□□□□□ -1.09
SMAD4-217ENST00000611848 DLGAP1O14490 977 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 SOCS2O14508 198 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 DNAJB6O75190 326 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ERN1O75460 977 aaKnown RBP8.27□□□□□ -1.09
SMAD4-217ENST00000611848 JRKO75564 520 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ETHE1O95571 254 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 FAM58BPP0C7Q3 252 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 C8orf89P0DMQ9 161 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 SDC1P18827 310 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 PAX7P23759 505 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 CERS1P27544 350 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 LIM2P55344 173 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 POLE2P56282 527 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 C21orf58P58505 322 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 MTPNP58546 118 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 PHC1P78364 1004 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 LINC00303Q3SY05 128 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 LIN52Q52LA3 116 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 TMEM205Q6UW68 189 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 KIRREL2Q6UWL6 708 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ZNF793Q6ZN11 406 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 PAGE2Q7Z2X7 111 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ZCCHC7Q8N3Z6 543 aaKnown RBP8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ACOT4Q8N9L9 421 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 TNIP2Q8NFZ5 429 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 TFAP2CQ92754 450 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 APIPQ96GX9 242 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 CNBD2Q96M20 576 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 NSMCE2Q96MF7 247 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 OR52E6Q96RD3 313 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 C9orf16Q9BUW7 83 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ANKRD60Q9BZ19 345 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ING2Q9H160 280 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ADNPQ9H2P0 1102 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 DDX31Q9H8H2 851 aaKnown RBP8.27□□□□□ -1.09
SMAD4-217ENST00000611848 SERHLQ9NQF3 203 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 LANCL2Q9NS86 450 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 MS4A12Q9NXJ0 267 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ZNF639Q9UID6 485 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 TUBD1Q9UJT1 453 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 ADAM29Q9UKF5 820 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 MMACHCQ9Y4U1 282 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 IGSF10Q6WRI0 2623 aa8.27□□□□□ -1.09
SMAD4-217ENST00000611848 LOC102723996A0A087X1L8 192 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms