RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PVRP15151 417 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 GABRB1P18505 474 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 IGFBP4P22692 258 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 MAGEA8P43361 318 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 TNFRSF17Q02223 184 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 WDR53Q7Z5U6 358 aaPredicted RBP12.81□□□□□ -0.36
NEK3-205ENST00000610828 ABI3BPQ7Z7G0 1075 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 OR4N4Q8N0Y3 316 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 MIPOL1Q8TD10 442 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 MYDGFQ969H8 173 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 TM4SF19Q96DZ7 209 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 TOE1Q96GM8 510 aaKnown RBP12.81□□□□□ -0.36
NEK3-205ENST00000610828 DHRS1Q96LJ7 313 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 BTBD2Q9BX70 525 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 UCK2Q9BZX2 261 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 FTSJ1Q9UET6 329 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 ACAD8Q9UKU7 415 aa12.81□□□□□ -0.36
NEK3-205ENST00000610828 LRP4O75096 1905 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 A0A0G2JPF8 293 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 URADA6NGE7 173 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 ZAR1LA6NP61 321 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 HNRNPCL2B2RXH8 293 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 HNRNPCL3B7ZW38 293 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 OXSR1O95747 527 aaPredicted RBP12.8□□□□□ -0.36
NEK3-205ENST00000610828 CELA2BP08218 269 aaPredicted RBP12.8□□□□□ -0.36
NEK3-205ENST00000610828 HNRNPCL4P0DMR1 293 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 CNR2P34972 360 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 UGT2B15P54855 530 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 SMIM11AP58511 58 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 OLR1P78380 273 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 OCA2Q04671 838 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 MLIPQ5VWP3 458 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 PTCHD4Q6ZW05 846 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 OR4N5Q8IXE1 308 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 LRRC25Q8N386 305 aaPredicted RBP12.8□□□□□ -0.36
NEK3-205ENST00000610828 OR6T1Q8NGN1 323 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 GPBAR1Q8TDU6 330 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 KLHL6Q8WZ60 621 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 YIPF6Q96EC8 236 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 C10orf90Q96M02 699 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 SERINC2Q96SA4 455 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 ZFYVE21Q9BQ24 234 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 FNDC11Q9BVV2 318 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 ROGDIQ9GZN7 287 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 PLGRKTQ9HBL7 147 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 POLMQ9NP87 494 aaPredicted RBP12.8□□□□□ -0.36
NEK3-205ENST00000610828 C11orf16Q9NQ32 467 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 CTPS2Q9NRF8 586 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 HRASLS2Q9NWW9 162 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 MS4A12Q9NXJ0 267 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 ETAA1Q9NY74 926 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 PHF11Q9UIL8 331 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 MGAT4BQ9UQ53 548 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 ZNF860A6NHJ4 632 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 H3BN98 237 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 B3GALT2O43825 422 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 DNAJB6O75190 326 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 EPPINO95925 133 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 LGI1O95970 557 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 CDK1P06493 297 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 OSMP13725 252 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 ALDH4A1P30038 563 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 XKP51811 444 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 SIM1P81133 766 aaPredicted RBP12.8□□□□□ -0.36
NEK3-205ENST00000610828 TARDBPQ13148 414 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEK3-205ENST00000610828 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 TAF8Q7Z7C8 310 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 ZNF761Q86XN6 746 aaPredicted RBP12.8□□□□□ -0.36
NEK3-205ENST00000610828 STX19Q8N4C7 294 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 CAMKVQ8NCB2 501 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 RERGQ96A58 199 aaPredicted RBP12.8□□□□□ -0.36
NEK3-205ENST00000610828 GPR174Q9BXC1 333 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 GSDMCQ9BYG8 508 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 POT1Q9NUX5 634 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 DNAAF2Q9NVR5 837 aaKnown RBP12.8□□□□□ -0.36
NEK3-205ENST00000610828 KCMF1Q9P0J7 381 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 PILRAQ9UKJ1 303 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 DSPPQ9NZW4 1301 aa12.8□□□□□ -0.36
NEK3-205ENST00000610828 C2orf74A8MZ97 194 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 CLPXO76031 633 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 IGFBP1P08833 259 aaPredicted RBP12.79□□□□□ -0.36
NEK3-205ENST00000610828 THEGLP0DJG4 465 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 SMIM10L1P0DMW3 83 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 TLX1P31314 330 aaPredicted RBP12.79□□□□□ -0.36
NEK3-205ENST00000610828 VBP1P61758 197 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 RUNX2Q13950 521 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ATAD3BQ5T9A4 648 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 UBE2UQ5VVX9 321 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 KIAA0895LQ68EN5 471 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 PGBD2Q6P3X8 592 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 FAM111BQ6SJ93 734 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 FAM92BQ6ZTR7 304 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 ABHD13Q7L211 337 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 C16orf62Q7Z3J2 963 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 OR7G2Q8NG99 324 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 SLC37A2Q8TED4 501 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 SMIM10Q96HG1 83 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 POLR2J3Q9H1A7 115 aaKnown RBP12.79□□□□□ -0.36
NEK3-205ENST00000610828 SLC38A1Q9H2H9 487 aa12.79□□□□□ -0.36
NEK3-205ENST00000610828 EVA1BQ9NVM1 165 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms