RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 FAM214AQ32MH5 1076 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 LRIT3Q3SXY7 679 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 NDUFAF5Q5TEU4 345 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 TTLL10Q6ZVT0 673 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 R3HCC1LQ7Z5L2 792 aaKnown RBP9.29□□□□□ -0.92
CTCFL-222ENST00000609232 HIPK1Q86Z02 1210 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 EPHX4Q8IUS5 362 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 KLHDC8AQ8IYD2 350 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 OR4N4Q8N0Y3 316 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 OR13F1Q8NGS4 319 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 OR9A2Q8NGT5 310 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 ZFP90Q8TF47 636 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 DOK1Q99704 481 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 TUBA1CQ9BQE3 449 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 TVP23BQ9NYZ1 205 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 DNAJC27Q9NZQ0 273 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 GMEB2Q9UKD1 530 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 CENPEQ02224 2701 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 LRRK1Q38SD2 2015 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 FAM171A2A8MVW0 826 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 TNFRSF11BO00300 401 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 MAN2B1O00754 1011 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 IDH3BO43837 385 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 CAPNS1P04632 268 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 THRBP10828 461 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 PEPDP12955 493 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 OR1D4P47884 311 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 TARDBPQ13148 414 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTCFL-222ENST00000609232 ATAD3BQ5T9A4 648 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 DLEU7Q6UYE1 221 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 OOSP2Q86WS3 158 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 ADAMTS16Q8TE57 1224 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 PEX11GQ96HA9 241 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 FEVQ99581 238 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 ACTR3BQ9P1U1 418 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 ANKMY1Q9P2S6 941 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 DHCR7Q9UBM7 475 aaKnown RBP9.29□□□□□ -0.92
CTCFL-222ENST00000609232 IFT52Q9Y366 437 aa9.29□□□□□ -0.92
CTCFL-222ENST00000609232 A0A096LPI6 279 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 A0A0A6YYC8 382 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 GPR89AB7ZAQ6 455 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 H0YIV9 168 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 I3L1I5 382 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SOX1O00570 391 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 HAT1O14929 419 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 BCAS1O75363 584 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 GPR89BP0CG08 455 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 IL9P15248 144 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 JUNDP17535 347 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 FUT1P19526 365 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PRPS1L1P21108 318 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 C21orf33P30042 268 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 MC3RP41968 323 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PIK3CBP42338 1070 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CCT3P49368 545 aaKnown RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CCR8P51685 355 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CLDN6P56747 220 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 COX10Q12887 443 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SCARB2Q14108 478 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 KIAA0040Q15053 153 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 DGUOKQ16854 277 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 AGAP7PQ5VUJ5 663 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CYP4Z1Q86W10 505 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 AVL9Q8NBF6 648 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 MINDY2Q8NBR6 621 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 GPR151Q8TDV0 419 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 HSPA12BQ96MM6 686 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 TIMM29Q9BSF4 260 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 FUNDC2Q9BWH2 189 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 UGT2B28Q9BY64 529 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 TP63Q9H3D4 680 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ARMC1Q9NVT9 282 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 MALT1Q9UDY8 824 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ATXN7L1Q9ULK2 861 aaPredicted RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SLC6A14Q9UN76 642 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ENTPD4Q9Y227 616 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ATG4BQ9Y4P1 393 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 COLEC10Q9Y6Z7 277 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 TRBC2A0A5B9 178 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 LRRTM2O43300 516 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 RASAL1O95294 804 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CPN2P22792 545 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CXCR2P25025 360 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SHMT2P34897 504 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SLC9A3P48764 834 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 TUBA1BP68363 451 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SHC2P98077 582 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 BNIP2Q12982 314 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SELENBP1Q13228 472 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 RAPSNQ13702 412 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CCINQ13939 588 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 NFATC4Q14934 902 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 UBE2UQ5VVX9 321 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 FAM111BQ6SJ93 734 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PLEKHG7Q6ZR37 379 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 USP43Q70EL4 1123 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 TUBA1AQ71U36 451 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 C8orf59Q8N0T1 100 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms