RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ALOX12P18054 663 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 PRKACGP22612 351 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 CCL7P80098 99 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 VLDLRP98155 873 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 C16orf72Q14CZ0 275 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 SF3A2Q15428 464 aaKnown RBP11.02□□□□□ -0.65
VRK3-223ENST00000601341 DEFB110Q30KQ9 67 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 TCTE1Q5JU00 501 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 SNAP47Q5SQN1 464 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 SYT6Q5T7P8 510 aaPredicted RBP11.02□□□□□ -0.65
VRK3-223ENST00000601341 PRR23CQ6ZRP0 262 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 CCDC80Q76M96 950 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 PRSS33Q8NF86 280 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 RHBDD1Q8TEB9 315 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 FCGR1BQ92637 280 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 SMIM10Q96HG1 83 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 SLC41A2Q96JW4 573 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 HRASLS5Q96KN8 279 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 FUNDC2Q9BWH2 189 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 EPS8L2Q9H6S3 715 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 MIEF1Q9NQG6 463 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 VNN3Q9NY84 501 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 SLC22A7Q9Y694 548 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 ADAMTS9Q9P2N4 1935 aa11.02□□□□□ -0.65
VRK3-223ENST00000601341 FRYLO94915 3013 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 A0A1W2PQM1 296 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 PFDN1O60925 122 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 IFNA14P01570 189 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 FURINP09958 794 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 DRD2P14416 443 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 ITGA2P17301 1181 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 DDCP20711 480 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 EFNA1P20827 205 aaPredicted RBP11.01□□□□□ -0.65
VRK3-223ENST00000601341 CERS1P27544 350 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 GABRA4P48169 554 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 SEPHS1P49903 392 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 SELENOWP63302 87 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 KCNJ10P78508 379 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 IL5RAQ01344 420 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 SLAMF1Q13291 335 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 MRM1Q6IN84 353 aaKnown RBP11.01□□□□□ -0.65
VRK3-223ENST00000601341 SLC16A12Q6ZSM3 486 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 PRSS48Q7RTY5 328 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 D2HGDHQ8N465 521 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 AMER3Q8N944 861 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 TTC29Q8NA56 475 aaPredicted RBP11.01□□□□□ -0.65
VRK3-223ENST00000601341 SMYD1Q8NB12 490 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 OR4D9Q8NGE8 314 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 OR52N2Q8NGI0 321 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 ZCCHC10Q8TBK6 192 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 MIPOL1Q8TD10 442 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 KLHL6Q8WZ60 621 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 RORBQ92753 470 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 PPCDCQ96CD2 204 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 VMP1Q96GC9 406 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 ZNF285Q96NJ3 590 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 SERINC2Q96SA4 455 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 PSD2Q9BQI7 771 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 FAIM2Q9BWQ8 316 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 NAA50Q9GZZ1 169 aaKnown RBP11.01□□□□□ -0.65
VRK3-223ENST00000601341 ANKHQ9HCJ1 492 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 THSD1Q9NS62 852 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 KRT84Q9NSB2 600 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 FAIMQ9NVQ4 179 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 LYARQ9NX58 379 aaKnown RBP11.01□□□□□ -0.65
VRK3-223ENST00000601341 THUMPD1Q9NXG2 353 aaKnown RBP11.01□□□□□ -0.65
VRK3-223ENST00000601341 PDP1Q9P0J1 537 aaPredicted RBP11.01□□□□□ -0.65
VRK3-223ENST00000601341 SH3BP4Q9P0V3 963 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 ENOPH1Q9UHY7 261 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 EXO1Q9UQ84 846 aaKnown RBP11.01□□□□□ -0.65
VRK3-223ENST00000601341 ERVK-11Q9UQG0 969 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 GMPPBQ9Y5P6 360 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 U3KQV3 271 aa11.01□□□□□ -0.65
VRK3-223ENST00000601341 A8MU76 341 aa11□□□□□ -0.65
VRK3-223ENST00000601341 CDX4O14627 284 aaPredicted RBP11□□□□□ -0.65
VRK3-223ENST00000601341 B3GALT2O43825 422 aa11□□□□□ -0.65
VRK3-223ENST00000601341 ANKRD34CP0C6C1 535 aa11□□□□□ -0.65
VRK3-223ENST00000601341 ZNF182P17025 639 aaPredicted RBP11□□□□□ -0.65
VRK3-223ENST00000601341 AGXTP21549 392 aa11□□□□□ -0.65
VRK3-223ENST00000601341 MC1RQ01726 317 aa11□□□□□ -0.65
VRK3-223ENST00000601341 EMX1Q04741 257 aaPredicted RBP11□□□□□ -0.65
VRK3-223ENST00000601341 SPEM2Q0P670 501 aa11□□□□□ -0.65
VRK3-223ENST00000601341 NDUFA9Q16795 377 aa11□□□□□ -0.65
VRK3-223ENST00000601341 PRTGQ2VWP7 1150 aa11□□□□□ -0.65
VRK3-223ENST00000601341 DEFB134Q4QY38 66 aa11□□□□□ -0.65
VRK3-223ENST00000601341 NDUFAF5Q5TEU4 345 aa11□□□□□ -0.65
VRK3-223ENST00000601341 DGLUCYQ7Z3D6 616 aa11□□□□□ -0.65
VRK3-223ENST00000601341 B3GNT8Q7Z7M8 397 aa11□□□□□ -0.65
VRK3-223ENST00000601341 CLECL1Q8IZS7 167 aa11□□□□□ -0.65
VRK3-223ENST00000601341 FAR1Q8WVX9 515 aa11□□□□□ -0.65
VRK3-223ENST00000601341 ATOH1Q92858 354 aaPredicted RBP11□□□□□ -0.65
VRK3-223ENST00000601341 ZNF764Q96H86 408 aaPredicted RBP11□□□□□ -0.65
VRK3-223ENST00000601341 SIGLEC11Q96RL6 698 aa11□□□□□ -0.65
VRK3-223ENST00000601341 EDEM2Q9BV94 578 aa11□□□□□ -0.65
VRK3-223ENST00000601341 ZNF768Q9H5H4 540 aaKnown RBP11□□□□□ -0.65
VRK3-223ENST00000601341 TMEM9BQ9NQ34 198 aa11□□□□□ -0.65
VRK3-223ENST00000601341 STARD5Q9NSY2 213 aa11□□□□□ -0.65
VRK3-223ENST00000601341 SEMA4GQ9NTN9 838 aa11□□□□□ -0.65
VRK3-223ENST00000601341 PLCXD1Q9NUJ7 323 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms