RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 SLC22A8Q8TCC7 542 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 GRHL3Q8TE85 626 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 NUDT8Q8WV74 236 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 CIDECQ96AQ7 238 aaPredicted RBP10.26□□□□□ -0.77
LIG1-211ENST00000596457 MIB2Q96AX9 1013 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 FCRL1Q96LA6 429 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 WWTR1Q9GZV5 400 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 GLIPR2Q9H4G4 154 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 INTS9Q9NV88 658 aaKnown RBP10.26□□□□□ -0.77
LIG1-211ENST00000596457 ZNF446Q9NWS9 450 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 EHD3Q9NZN3 535 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 VPS4AQ9UN37 437 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 FBN2P35556 2912 aa10.26□□□□□ -0.77
LIG1-211ENST00000596457 RELNP78509 3460 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 G3V3Y1 287 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 NEURL1O76050 574 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 CBX7O95931 251 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 G6PDP11413 515 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 LBPP18428 481 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 TRHRP34981 398 aaPredicted RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 HPCAL1P37235 193 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 MANFP55145 182 aaKnown RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 NME5P56597 212 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 GPR85P60893 370 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 OCRLQ01968 901 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 EMX2Q04743 252 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 HSPB3Q12988 150 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 PTGR1Q14914 329 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 EBPQ15125 230 aaKnown RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 PGS1Q32NB8 556 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 ZNF628Q5EBL2 1059 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 RPUSD3Q6P087 351 aaKnown RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 OPN5Q6U736 354 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 TMEM107Q6UX40 140 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 ZNF551Q7Z340 670 aaPredicted RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 SZRD1Q7Z422 152 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 MDGA2Q7Z553 956 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 R3HCC1LQ7Z5L2 792 aaKnown RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 TAGAPQ8N103 731 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 KRTCAP2Q8N6L1 136 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 FAM98AQ8NCA5 519 aaKnown RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 FAM13CQ8NE31 585 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 OR7G2Q8NG99 324 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 NUBPLQ8TB37 319 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 ITPAQ9BY32 194 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 WDR55Q9H6Y2 383 aaPredicted RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 MEAF6Q9HAF1 191 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 TIMMDC1Q9NPL8 285 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 AGPAT4Q9NRZ5 378 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 NOP53Q9NZM5 478 aaKnown RBP10.25□□□□□ -0.77
LIG1-211ENST00000596457 HAO1Q9UJM8 370 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 DTX4Q9Y2E6 619 aa10.25□□□□□ -0.77
LIG1-211ENST00000596457 TRPC5OSA6NMA1 111 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 SDHDO14521 159 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 SCAMP2O15127 329 aaKnown RBP10.24□□□□□ -0.77
LIG1-211ENST00000596457 HDAC3O15379 428 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 BCAS2O75934 225 aaPredicted RBP10.24□□□□□ -0.77
LIG1-211ENST00000596457 NADKO95544 446 aaPredicted RBP10.24□□□□□ -0.77
LIG1-211ENST00000596457 GPX3P22352 226 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 EPHA3P29320 983 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 SOX18P35713 384 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 RFC3P40938 356 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 MC3RP41968 323 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 MEOX1P50221 254 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 PRKAG1P54619 331 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 DIO3P55073 304 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 NRG3P56975 720 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 DUSP8Q13202 625 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 UBAP2LQ14157 1087 aaKnown RBP10.24□□□□□ -0.77
LIG1-211ENST00000596457 MPEG1Q2M385 716 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 HSP90B2PQ58FF3 399 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 CPTPQ5TA50 214 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 ZNF227Q86WZ6 799 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 SULF2Q8IWU5 870 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 ARMC10Q8N2F6 343 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 CPSF7Q8N684 471 aaKnown RBP10.24□□□□□ -0.77
LIG1-211ENST00000596457 BCORP1Q8N888 145 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 GALNT11Q8NCW6 608 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 ZFP28Q8NHY6 868 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 ZNF675Q8TD23 568 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 ADIPOR1Q96A54 375 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 SCMH1Q96GD3 660 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 AMDHD1Q96NU7 426 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 TAAR6Q96RI8 345 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 DPY30Q9C005 99 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 OLAHQ9NV23 265 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 TAS2R7Q9NYW3 318 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 PRODH2Q9UF12 536 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 ZNF639Q9UID6 485 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 CFL2Q9Y281 166 aa10.24□□□□□ -0.77
LIG1-211ENST00000596457 TCP11X1B4DZS4 312 aa10.23□□□□□ -0.77
LIG1-211ENST00000596457 SLCO1B7G3V0H7 640 aa10.23□□□□□ -0.77
LIG1-211ENST00000596457 KLRC4-KLRK1H3BQV0 150 aa10.23□□□□□ -0.77
LIG1-211ENST00000596457 KLF11O14901 512 aa10.23□□□□□ -0.77
LIG1-211ENST00000596457 CFLARO15519 480 aa10.23□□□□□ -0.77
LIG1-211ENST00000596457 PEX1O43933 1283 aa10.23□□□□□ -0.77
LIG1-211ENST00000596457 NME2P1O60361 137 aa10.23□□□□□ -0.77
LIG1-211ENST00000596457 DIAPH2O60879 1101 aa10.23□□□□□ -0.77
LIG1-211ENST00000596457 CRYABP02511 175 aaKnown RBP10.23□□□□□ -0.77
LIG1-211ENST00000596457 P04436 131 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms