RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ALDH6A1Q02252 535 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 EMX2Q04743 252 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 DUSP2Q05923 314 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 LTB4RQ15722 352 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 TRMT12Q53H54 448 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 IL23RQ5VWK5 629 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF324BQ6AW86 544 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 MDGA2Q7Z553 956 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 SULF2Q8IWU5 870 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 LRRC34Q8IZ02 419 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 NATD1Q8N6N6 113 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF441Q8N8Z8 693 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 OR52R1Q8NGF1 315 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 OR9A2Q8NGT5 310 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 C16orf52Q8NHV5 167 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 ZFP28Q8NHY6 868 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 GFM2Q969S9 779 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 ADIPOR1Q96A54 375 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 SPACA9Q96E40 222 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 HSPBAP1Q96EW2 488 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 PRPF18Q99633 342 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 SH3GL2Q99962 352 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 SLX1AQ9BQ83 275 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 SACM1LQ9NTJ5 587 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 TAS2R9Q9NYW1 312 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 SH3BP4Q9P0V3 963 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 BAIAP2L1Q9UHR4 511 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 MAPRE3Q9UPY8 281 aa15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 EXO1Q9UQ84 846 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-212ENST00000596163 A0A087WV62 115 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 ACOX3O15254 700 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 COQ9O75208 318 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 SNNO75324 88 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 LRATO95237 230 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 NADKO95544 446 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 CBX7O95931 251 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 JUNP05412 331 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 IFI6P09912 130 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 FBXO45P0C2W1 286 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 NAGAP17050 411 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 CNR1P21554 472 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 GPX3P22352 226 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 MEOX1P50221 254 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 MRPS35P82673 323 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 EXOSC7Q15024 291 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF791Q3KP31 576 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 KRTCAP3Q53RY4 240 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 SLC22A10Q63ZE4 541 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 LIX1Q8N485 282 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 CLHC1Q8NHS4 586 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 KAT2AQ92830 837 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 ZBED6CLQ96FA7 236 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 LCORQ96JN0 433 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 ATAD3AQ9NVI7 634 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 PNPOQ9NVS9 261 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 NOP53Q9NZM5 478 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 CNIH4Q9P003 139 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 NPFFR2Q9Y5X5 522 aa15.96■□□□□ 0.15
SHKBP1-212ENST00000596163 TRPC5OSA6NMA1 111 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 PLOD2O00469 737 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 KLF11O14901 512 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 ZNF24P17028 368 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 PRPS1L1P21108 318 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 DRD5P21918 477 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 PTGER1P34995 402 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 PPICP45877 212 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 PMP22Q01453 160 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 PDE7AQ13946 482 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 TTMPQ5BVD1 217 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 FRMD6Q96NE9 622 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 AMDHD1Q96NU7 426 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 FAM173AQ9BQD7 235 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 C1orf50Q9BV19 199 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 GLIPR2Q9H4G4 154 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 AKTIPQ9H8T0 292 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 ASIC5Q9NY37 505 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 SEC14L3Q9UDX4 400 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 GIMAP2Q9UG22 337 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 ATP6V1HQ9UI12 483 aa15.95■□□□□ 0.14
SHKBP1-212ENST00000596163 ZNF354AO60765 605 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 GPC1P35052 558 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 EMDP50402 254 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 MANFP55145 182 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 SRSF11Q05519 484 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 RBPJQ06330 500 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 MRPL49Q13405 166 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 NTRK2Q16620 822 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 PRSS53Q2L4Q9 553 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 CPTPQ5TA50 214 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 FHL5Q5TD97 284 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 LYPD8Q6UX82 237 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 BNC2Q6ZN30 1099 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 RGS9BPQ6ZS82 235 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 GK5Q6ZS86 529 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 FAM47EQ6ZV65 393 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 CPSF7Q8N684 471 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 FAM13CQ8NE31 585 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 PAQR8Q8TEZ7 354 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 DYDC1Q8WWB3 177 aa15.94■□□□□ 0.14
SHKBP1-212ENST00000596163 ZNF75CPQ92670 426 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms