RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PLXDC2Q6UX71 529 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 ANGPTL8Q6UXH0 198 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 CYS1Q717R9 158 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 CMC1Q7Z7K0 106 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 LUZP2Q86TE4 346 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 CREG2Q8IUH2 290 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 LRRC75A-AS1Q8N1F1 130 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 VWA5B2Q8N398 1253 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 TEX9Q8N6V9 391 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 OR1J4Q8NGS1 313 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 NUDT8Q8WV74 236 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 CDKL2Q92772 493 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 WNT2BQ93097 391 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 HGDQ93099 445 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 NODALQ96S42 347 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 OR10A5Q9H207 317 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 WDR41Q9HAD4 459 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 PSD3Q9NYI0 1048 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 TXNDC16Q9P2K2 825 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 CLCF1Q9UBD9 225 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 DTX4Q9Y2E6 619 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 TESMINQ9Y4I5 508 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 MPDZO75970 2070 aa9.07□□□□□ -0.96
LIG1-209ENST00000596104 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 LRRC14BA6NHZ5 514 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 EFCAB8A8MWE9 144 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 DEFB108AA8MXU0 73 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 H7C1Q1 480 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 UGDHO60701 494 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 ICOSLGO75144 302 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 PPM1BO75688 479 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 TNFSF13O75888 250 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 GBAP04062 536 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 RHOXF2BP0C7M4 288 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 CPA2P48052 419 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 GFRA1P56159 465 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 NNATQ16517 81 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 SLC30A6Q6NXT4 461 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 CYP20A1Q6UW02 462 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 NUDT13Q86X67 352 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 MYLK4Q86YV6 388 aaPredicted RBP9.06□□□□□ -0.96
LIG1-209ENST00000596104 TRIM42Q8IWZ5 723 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 GCNT2Q8N0V5 402 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 OR7G1Q8NGA0 311 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 WDR20Q8TBZ3 569 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 PYROXD1Q8WU10 500 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 INTS12Q96CB8 462 aaKnown RBP9.06□□□□□ -0.96
LIG1-209ENST00000596104 CTHRC1Q96CG8 243 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 TM9SF2Q99805 663 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 OR2B2Q9GZK3 357 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 PIGMQ9H3S5 423 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 METTL7AQ9H8H3 244 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 ACTR8Q9H981 624 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 NMRAL1Q9HBL8 299 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 GALNT9Q9HCQ5 603 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 SERHLQ9NQF3 203 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 EXO1Q9UQ84 846 aaKnown RBP9.06□□□□□ -0.96
LIG1-209ENST00000596104 SNX24Q9Y343 169 aa9.06□□□□□ -0.96
LIG1-209ENST00000596104 CSPG4Q6UVK1 2322 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 NINQ8N4C6 2090 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 A0A1W2PNV4 684 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 C2orf72A6NCS6 295 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 H0Y3Z8 333 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 FOXE1O00358 373 aaPredicted RBP9.05□□□□□ -0.96
LIG1-209ENST00000596104 PLOD2O00469 737 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 CASKO14936 926 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 CTIFO43310 598 aaKnown RBP9.05□□□□□ -0.96
LIG1-209ENST00000596104 HCRTR2O43614 444 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 SMPD2O60906 423 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 UGT2B11O75310 529 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 SEMA3DO95025 777 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 LTA4HP09960 611 aaKnown RBP9.05□□□□□ -0.96
LIG1-209ENST00000596104 CPMP14384 443 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 KRT15P19012 456 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 NT5EP21589 574 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 PIK3R1P27986 724 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 SPRP35270 261 aaPredicted RBP9.05□□□□□ -0.96
LIG1-209ENST00000596104 PCYT1AP49585 367 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 LHX2P50458 406 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 XKP51811 444 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 NEK2P51955 445 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 GPX6P59796 221 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 PHEXP78562 749 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 SRYQ05066 204 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 MGAT2Q10469 447 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 SNTA1Q13424 505 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 CPSF6Q16630 551 aaKnown RBP eCLIP9.05□□□□□ -0.96
LIG1-209ENST00000596104 ENPP6Q6UWR7 440 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 PRSS57Q6UWY2 283 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 NUP54Q7Z3B4 507 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 TBC1D1Q86TI0 1168 aaPredicted RBP9.05□□□□□ -0.96
LIG1-209ENST00000596104 P3H2Q8IVL5 708 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 CENPLQ8N0S6 344 aaPredicted RBP9.05□□□□□ -0.96
LIG1-209ENST00000596104 WDSUB1Q8N9V3 476 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 L3MBTL4Q8NA19 623 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 OR4K14Q8NGD5 310 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 PIGTQ969N2 578 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 NXNL1Q96CM4 212 aa9.05□□□□□ -0.96
LIG1-209ENST00000596104 REPS1Q96D71 796 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms