RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	PAFAH2	Q99487	392 aa		12.5	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CAPS2	Q9BXY5	557 aa		12.5	□□□□□ -0.41
SHKBP1-208	ENST00000595726	NFU1	Q9UMS0	254 aa		12.5	□□□□□ -0.41
SHKBP1-208	ENST00000595726	RAI1	Q7Z5J4	1906 aa	Predicted RBP	12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726		A0A096LPK6	155 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SUPT3H	B4E1H0	165 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TLX2	O43763	284 aa	Predicted RBP	12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CD5L	O43866	347 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CCNT2	O60583	730 aa	Known RBP	12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SUPT3H	O75486	399 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TNFSF13	O75888	250 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	IGKV3-11	P04433	115 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	INHBA	P08476	426 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	MTHFD2	P13995	350 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	PAX1	P15863	534 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	EPOR	P19235	508 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SERPINB3	P29508	390 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	DIO3	P55073	304 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	FBXW4	P57775	412 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TBL3	Q12788	808 aa	Known RBP	12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	FAM83E	Q2M2I3	478 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	ANKRD34A	Q69YU3	496 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	ADNP2	Q6IQ32	1131 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TMIGD1	Q6UXZ0	262 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	LRRC70	Q7Z2Q7	622 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SLC15A4	Q8N697	577 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SNX31	Q8N9S9	440 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	RHEBL1	Q8TAI7	183 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	UBTD2	Q8WUN7	234 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	WDR34	Q96EX3	536 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	RILP	Q96NA2	401 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	FAM111A	Q96PZ2	611 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	GAL3ST4	Q96RP7	486 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SERINC2	Q96SA4	455 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	G6PC3	Q9BUM1	346 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	C19orf24	Q9BVV8	132 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CD244	Q9BZW8	370 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	PIGM	Q9H3S5	423 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	EHD1	Q9H4M9	534 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	PACSIN3	Q9UKS6	424 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	C15orf41	Q9Y2V0	281 aa		12.49	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TENM1	Q9UKZ4	2725 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	GNB5	O14775	395 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CLGN	O14967	610 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	KLHL2	O95198	593 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	PLAU	P00749	431 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	RHOXF2B	P0C7M4	288 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CD22	P20273	847 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	GSTM2	P28161	218 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TYK2	P29597	1187 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	MAGEA12	P43365	314 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SERTAD2	Q14140	314 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	DOC2A	Q14183	400 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	E2F2	Q14209	437 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	ACAP2	Q15057	778 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	NTRK2	Q16620	822 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	ABHD17C	Q6PCB6	329 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	IFT20	Q8IY31	132 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	KRT78	Q8N1N4	520 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TTL	Q8NG68	377 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	OR2L5	Q8NG80	312 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	UHMK1	Q8TAS1	419 aa	Known RBP	12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	NTNG2	Q96CW9	530 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	PTCD3	Q96EY7	689 aa	Known RBP	12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	GPR78	Q96P69	363 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TM9SF2	Q99805	663 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	MAPKAP1	Q9BPZ7	522 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	RHOXF2	Q9BQY4	288 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	PITHD1	Q9GZP4	211 aa	Predicted RBP	12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	NT5DC2	Q9H857	520 aa		12.48	□□□□□ -0.41
SHKBP1-208	ENST00000595726	TG	P01266	2768 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CR1	P17927	2039 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726		A0A087WUV0	522 aa	Predicted RBP	12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726		A0A1W2PNV4	684 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CCDC189	A1A4V9	331 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	ANKRD33B	A6NCL7	494 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SYCE1L	A8MT33	242 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726		A8MV72	311 aa	Predicted RBP	12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	POC1B-GALNT4	F8VUJ3	575 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	H2AFY	O75367	372 aa	Known RBP	12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	FAM157C	P0CG43	387 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CPN1	P15169	458 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CCKAR	P32238	428 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	CD79B	P40259	229 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	MASP1	P48740	699 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	STAR	P49675	285 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SERPINB9	P50453	376 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	MTTP	P55157	894 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	RUNX1T1	Q06455	604 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	SETDB1	Q15047	1291 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	ZNF474	Q6S9Z5	364 aa	Predicted RBP	12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	VN1R5	Q7Z5H4	357 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	ADGRE4P	Q86SQ3	457 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	PLD6	Q8N2A8	252 aa	Known RBP	12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	DCAKD	Q8WVC6	231 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	WNT2B	Q93097	391 aa		12.47	□□□□□ -0.41
SHKBP1-208	ENST00000595726	STARD4	Q96DR4	205 aa		12.47	□□□□□ -0.41

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