RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 PTPN13Q12923 2485 aa5.38□□□□□ -1.55
SSX4B-201ENST00000595235 SVILO95425 2214 aa5.38□□□□□ -1.55
SSX4B-201ENST00000595235 USP9XQ93008 2570 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 HECTD1Q9ULT8 2610 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 PHF3Q92576 2039 aaKnown RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 A0A1B0GVC2 190 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 TLDC2A0PJX2 215 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SERTM1A2A2V5 107 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 AQP7O14520 342 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 COPEO14579 308 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 HNRNPRO43390 633 aaKnown RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CDH16O75309 829 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 TRIM3O75382 744 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CLDN14O95500 239 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SNRPB2P08579 225 aaKnown RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 NUDT17P0C025 328 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CPA3P15088 417 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CSNK2A2P19784 350 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 AGAP20933 346 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 ABCD3P28288 659 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CRHR1P34998 444 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 PTGDSP41222 190 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 KIR3DL1P43629 444 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CCT5P48643 541 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 EMDP50402 254 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SMSP52788 366 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 NUP107P57740 925 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 KCNJ2P63252 427 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SLC18A2Q05940 514 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 ACSM2AQ08AH3 577 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 ZNF763Q0D2J5 394 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 RPS6KA2Q15349 733 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CEBPEQ15744 281 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 GXYLT1Q4G148 440 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 C6orf163Q5TEZ5 329 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 FNDC7Q5VTL7 733 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 LIPMQ5VYY2 423 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 HLA-DQA1Q5Y7H0 255 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 ACSM2BQ68CK6 577 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CLEC6AQ6EIG7 209 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 RTL6Q6ICC9 239 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 GALNT18Q6P9A2 607 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 PAOXQ6QHF9 649 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 RGS9BPQ6ZS82 235 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 TICAM1Q8IUC6 712 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 C10orf107Q8IVU9 208 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CCDC116Q8IYX3 515 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 DND1Q8IYX4 353 aaKnown RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 TAGAPQ8N103 731 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SLC34A3Q8N130 599 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 GBP7Q8N8V2 638 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 C17orf47Q8NEP4 570 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 OR5M9Q8NGP3 310 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 OR9A2Q8NGT5 310 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 OR2T11Q8NH01 316 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 RDH11Q8TC12 318 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 ZNF675Q8TD23 568 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 AENQ8WTP8 325 aaKnown RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 DIO2Q92813 273 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 KAT2AQ92830 837 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 HGDQ93099 445 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SDCCAG3Q96C92 435 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 NTNG2Q96CW9 530 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 OMA1Q96E52 524 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 APOPT1Q96IL0 206 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 JSRP1Q96MG2 331 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 NODALQ96S42 347 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SMC6Q96SB8 1091 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 DOHHQ9BU89 302 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 MECRQ9BV79 373 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SLC6A15Q9H2J7 730 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 TP63Q9H3D4 680 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 ZFP64Q9NPA5 681 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 PFDN4Q9NQP4 134 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 OXSMQ9NWU1 459 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SIRT5Q9NXA8 310 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 MKS1Q9NXB0 559 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 EHD3Q9NZN3 535 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CNIH4Q9P003 139 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SLC17A7Q9P2U7 560 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 GRID1Q9ULK0 1009 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 BOKQ9UMX3 212 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 EXO1Q9UQ84 846 aaKnown RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CCL27Q9Y4X3 112 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 POLR3HQ9Y535 204 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 FAM215AQ9Y5M1 114 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 ZNF780BQ9Y6R6 833 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 V9GYY5 206 aaPredicted RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 CNTRLQ7Z7A1 2325 aa5.37□□□□□ -1.55
SSX4B-201ENST00000595235 SETXQ7Z333 2677 aaKnown RBP5.37□□□□□ -1.55
SSX4B-201ENST00000595235 ARHGAP21Q5T5U3 1957 aa5.36□□□□□ -1.55
SSX4B-201ENST00000595235 KIAA1549Q9HCM3 1950 aa5.36□□□□□ -1.55
SSX4B-201ENST00000595235 HCFC1P51610 2035 aa5.36□□□□□ -1.55
SSX4B-201ENST00000595235 GTF3C1Q12789 2109 aa5.36□□□□□ -1.55
SSX4B-201ENST00000595235 POLEQ07864 2286 aa5.36□□□□□ -1.55
SSX4B-201ENST00000595235 FLNCQ14315 2725 aa5.36□□□□□ -1.55
SSX4B-201ENST00000595235 TRGV5A0A0B4J1U4 118 aa5.36□□□□□ -1.55
SSX4B-201ENST00000595235 GNG14A0A1W2PPG7 69 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms