RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TMPRSS11DO60235 418 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 NPHS1O60500 1241 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 HCN1O60741 890 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 CCL3P10147 92 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 NR2F6P10588 404 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 DNAJA1P31689 397 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 SERPINB5P36952 375 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 DNASE1L1P49184 302 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 TRA2BP62995 288 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 IGLV3-21P80748 117 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 TBL3Q12788 808 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 MYBPHQ13203 477 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 SLC10A1Q14973 349 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 ZNF791Q3KP31 576 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 SPIN4Q56A73 249 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 TCHHL1Q5QJ38 904 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 WLSQ5T9L3 541 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 COMMD6Q7Z4G1 85 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 EXOC3L1Q86VI1 746 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 DGAT2Q96PD7 388 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 RRAGDQ9NQL2 400 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 TUBA8Q9NY65 449 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 Q9UFV3 132 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 L3MBTL1Q9Y468 752 aa16.16■□□□□ 0.18
SHKBP1-203ENST00000594298 ATP6AP2A0A1C7CYW4 349 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 A0A1W2PR48 441 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 TM9SF1O15321 606 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 ATP6AP2O75787 350 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 ZWINTO95229 277 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 GPR75O95800 540 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 CHEK2O96017 543 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 GBAP04062 536 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 IGKV3-11P04433 115 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 CELA3AP09093 270 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 GABRA1P14867 456 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 CREB1P16220 341 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 STT3AP46977 705 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 MAN2A2P49641 1150 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 ACSM2AQ08AH3 577 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 GALNT1Q10472 559 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 IMPG1Q17R60 797 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 SLC25A35Q3KQZ1 300 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 TNFAIP8L3Q5GJ75 292 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 C1orf185Q5T7R7 199 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 ACSM2BQ68CK6 577 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 C18orf63Q68DL7 685 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 OR52E8Q6IFG1 317 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 LIX1LQ8IVB5 337 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 SLC15A4Q8N697 577 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 C1orf52Q8N6N3 182 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 PPP1R14CQ8TAE6 165 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 NINJ1Q92982 152 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 SENP5Q96HI0 755 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 KCNA7Q96RP8 456 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 HBEGFQ99075 208 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 FAIM2Q9BWQ8 316 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 CXXC4Q9H2H0 198 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 KCNK9Q9NPC2 374 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 MCM8Q9UJA3 840 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 ACAD8Q9UKU7 415 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 PSME2Q9UL46 239 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 PCDHGB3Q9Y5G1 929 aa16.15■□□□□ 0.18
SHKBP1-203ENST00000594298 TRGV5A0A0B4J1U4 118 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 C1orf226A1L170 272 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 FAM221AA4D161 298 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 AZIN1O14977 448 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 FGF17O60258 216 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 AIFM1O95831 613 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 BPGMP07738 259 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 ALOX15P16050 662 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 ENDOUP21128 410 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 ADH7P40394 386 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 HTR6P50406 440 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 DLX5P56178 289 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 PLIN5Q00G26 463 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 ID2Q02363 134 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 FOLH1Q04609 750 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 SPDYAQ5MJ70 313 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 RIPPLY2Q5TAB7 128 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 SLC22A10Q63ZE4 541 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 LYPD8Q6UX82 237 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 NUDCD3Q8IVD9 361 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 OR4N5Q8IXE1 308 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 C9orf40Q8IXQ3 194 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 DND1Q8IYX4 353 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 SLC22A8Q8TCC7 542 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 PAQR8Q8TEZ7 354 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 ART5Q96L15 291 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 ACPTQ9BZG2 426 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 LDAHQ9H6V9 325 aa16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 ZNF703Q9H7S9 590 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 ARGLU1Q9NWB6 273 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-203ENST00000594298 PHF3Q92576 2039 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 MED13LQ71F56 2210 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 SLC28A1O00337 649 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 BIRC5O15392 142 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 OR10H2O60403 315 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 CTAG2O75638 210 aa16.13■□□□□ 0.17
SHKBP1-203ENST00000594298 NADKO95544 446 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms