RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ACTR8Q9H981 624 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 ZBTB26Q9HCK0 441 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 RYDENQ9NUL5 291 aaKnown RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 FOXD3Q9UJU5 478 aaPredicted RBP13.51□□□□□ -0.25
PNKP-202ENST00000593706 TMCO1Q9UM00 188 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 RNF11Q9Y3C5 154 aa13.51□□□□□ -0.25
PNKP-202ENST00000593706 A0A1B0GTL3 188 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 C2orf92A0A1B0GVN3 265 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 AHRRA9YTQ3 701 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 KDM4EB2RXH2 506 aaPredicted RBP13.5□□□□□ -0.25
PNKP-202ENST00000593706 EEF1E1-BLOC1S5C9J1V9 151 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 EEF1E1O43324 174 aaKnown RBP13.5□□□□□ -0.25
PNKP-202ENST00000593706 TRIM3O75382 744 aaPredicted RBP13.5□□□□□ -0.25
PNKP-202ENST00000593706 GPR75O95800 540 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 EPPINO95925 133 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 HOXB4P17483 251 aaPredicted RBP13.5□□□□□ -0.25
PNKP-202ENST00000593706 ARFIP1P53367 373 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 NRG3P56975 720 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 FBXW4P57775 412 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 RPS13P62277 151 aaKnown RBP13.5□□□□□ -0.25
PNKP-202ENST00000593706 SLC29A2Q14542 456 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 FBXL19-AS1Q494R0 122 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 C6orf163Q5TEZ5 329 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 BICRALQ6AI39 1079 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 TMEM64Q6YI46 380 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 PACS2Q86VP3 889 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 REPS1Q96D71 796 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 MTBPQ96DY7 904 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 ZNF629Q9UEG4 869 aaPredicted RBP13.5□□□□□ -0.25
PNKP-202ENST00000593706 PCDHGA11Q9Y5H2 935 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 ARID1AO14497 2285 aa13.5□□□□□ -0.25
PNKP-202ENST00000593706 HEATR5AQ86XA9 2040 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 TUBAL3A6NHL2 446 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 A8MT66 165 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 FOXE1O00358 373 aaPredicted RBP13.49□□□□□ -0.25
PNKP-202ENST00000593706 AIFM1O95831 613 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 RAF1P04049 648 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 SSTR4P31391 388 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 CEACAM8P31997 349 aaPredicted RBP13.49□□□□□ -0.25
PNKP-202ENST00000593706 TIMP3P35625 211 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 ARL1P40616 181 aaPredicted RBP13.49□□□□□ -0.25
PNKP-202ENST00000593706 ZNF136P52737 540 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 RPP38P78345 283 aaKnown RBP13.49□□□□□ -0.25
PNKP-202ENST00000593706 KEAP1Q14145 624 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 GGTA1PQ4G0N0 100 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 OR52E8Q6IFG1 317 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 CAMKMTQ7Z624 323 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 NUDT13Q86X67 352 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 KIF18BQ86Y91 864 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 MMP21Q8N119 569 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 ZNF483Q8TF39 744 aaPredicted RBP13.49□□□□□ -0.25
PNKP-202ENST00000593706 PHF21BQ96EK2 531 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 CDK15Q96Q40 435 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 TRIB1Q96RU8 372 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 TIMP4Q99727 224 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 NTMT1Q9BV86 223 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 PRDM14Q9GZV8 571 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 NOL11Q9H8H0 719 aaKnown RBP13.49□□□□□ -0.25
PNKP-202ENST00000593706 TEX10Q9NXF1 929 aaPredicted RBP13.49□□□□□ -0.25
PNKP-202ENST00000593706 PSD3Q9NYI0 1048 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 C15orf41Q9Y2V0 281 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 SLC6A5Q9Y345 797 aa13.49□□□□□ -0.25
PNKP-202ENST00000593706 TLN2Q9Y4G6 2542 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 A0A0A6YYD5 115 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 ANKRD33BA6NCL7 494 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 TMPRSS11DO60235 418 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 EEDO75530 441 aaKnown RBP13.48□□□□□ -0.25
PNKP-202ENST00000593706 SNX4O95219 450 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 CLDN9O95484 217 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 FAM58BPP0C7Q3 252 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 SLC35E2P0CK97 266 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 KRT15P19012 456 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 PTX3P26022 381 aaPredicted RBP13.48□□□□□ -0.25
PNKP-202ENST00000593706 PIK3R1P27986 724 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 BSGP35613 385 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 CDK9P50750 372 aaKnown RBP13.48□□□□□ -0.25
PNKP-202ENST00000593706 NEK2P51955 445 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 ADAM8P78325 824 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 CUL3Q13618 768 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 RCAN2Q14206 197 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 CPSF6Q16630 551 aaKnown RBP eCLIP13.48□□□□□ -0.25
PNKP-202ENST00000593706 MRM1Q6IN84 353 aaKnown RBP13.48□□□□□ -0.25
PNKP-202ENST00000593706 SH2D5Q6ZV89 423 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 RPS27LQ71UM5 84 aaKnown RBP13.48□□□□□ -0.25
PNKP-202ENST00000593706 LCA5Q86VQ0 697 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 GALNT12Q8IXK2 581 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 PRR22Q8IZ63 422 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 MBD6Q96DN6 1003 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 GSX1Q9H4S2 264 aaPredicted RBP13.48□□□□□ -0.25
PNKP-202ENST00000593706 DDX31Q9H8H2 851 aaKnown RBP13.48□□□□□ -0.25
PNKP-202ENST00000593706 PSMC3IPQ9P2W1 217 aaPredicted RBP13.48□□□□□ -0.25
PNKP-202ENST00000593706 ZNF225Q9UK10 706 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 ASB4Q9Y574 426 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 NPFFR2Q9Y5X5 522 aa13.48□□□□□ -0.25
PNKP-202ENST00000593706 A0A1W2PR48 441 aa13.47□□□□□ -0.25
PNKP-202ENST00000593706 WASHC1A8K0Z3 465 aa13.47□□□□□ -0.25
PNKP-202ENST00000593706 PPP6CO00743 305 aa13.47□□□□□ -0.25
PNKP-202ENST00000593706 SMIM24O75264 130 aa13.47□□□□□ -0.25
PNKP-202ENST00000593706 SEMA3DO95025 777 aa13.47□□□□□ -0.25
PNKP-202ENST00000593706 GBAP04062 536 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms