RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RBP1P09455 135 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 PORP16435 677 aaPredicted RBP21.86■■□□□ 1.09
LSM4-202ENST00000593564 PHBP35232 272 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 IFT88Q13099 833 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 TRAF3Q13114 568 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 GGTA1PQ4G0N0 100 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 CCNYL2Q5T2Q4 361 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 TIGD3Q6B0B8 471 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 TTC19Q6DKK2 380 aaPredicted RBP21.86■■□□□ 1.09
LSM4-202ENST00000593564 TGIF2LYQ8IUE0 185 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 PRR22Q8IZ63 422 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 METTL4Q8N3J2 472 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 ISL2Q96A47 359 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 UGT2B28Q9BY64 529 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 NXF5Q9H1B4 397 aaKnown RBP21.86■■□□□ 1.09
LSM4-202ENST00000593564 ACSS3Q9H6R3 686 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 ZBTB26Q9HCK0 441 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 CBLCQ9ULV8 474 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 EDARQ9UNE0 448 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 CAMK2AQ9UQM7 478 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 DTX4Q9Y2E6 619 aa21.86■■□□□ 1.09
LSM4-202ENST00000593564 ABCB1P08183 1280 aaPredicted RBP21.85■■□□□ 1.09
LSM4-202ENST00000593564 NAGAP17050 411 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 BMP7P18075 431 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 KRT15P19012 456 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 MAGEA12P43365 314 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 DAZAP2Q15038 168 aaPredicted RBP21.85■■□□□ 1.09
LSM4-202ENST00000593564 EIPR1Q53HC9 387 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 TMEM81Q6P7N7 255 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 CDC20BQ86Y33 519 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 VWA5B2Q8N398 1253 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 TRPC4APQ8TEL6 797 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 WDYHV1Q96HA8 205 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 NSUN5Q96P11 429 aaKnown RBP21.85■■□□□ 1.09
LSM4-202ENST00000593564 FETUBQ9UGM5 382 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 CES1P1Q9UKY3 287 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 CFL2Q9Y281 166 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 PCDHA9Q9Y5H5 950 aa21.85■■□□□ 1.09
LSM4-202ENST00000593564 ACANP16112 2415 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 MBD3L4A6NDZ8 208 aaPredicted RBP21.84■■□□□ 1.09
LSM4-202ENST00000593564 MBD3L3A6NE82 208 aaPredicted RBP21.84■■□□□ 1.09
LSM4-202ENST00000593564 GOLGA6L10A6NI86 522 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 MBD3L5A6NJ08 208 aaPredicted RBP21.84■■□□□ 1.09
LSM4-202ENST00000593564 GNB5O14775 395 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 GUCY1B2O75343 617 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 PPM1BO75688 479 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 PTPN6P29350 595 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 MAPK12P53778 367 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 ETF1P62495 437 aaKnown RBP21.84■■□□□ 1.09
LSM4-202ENST00000593564 SLC7A5Q01650 507 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 TOMM20Q15388 145 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 PRICKLE4Q2TBC4 344 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 DCST1Q5T197 706 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 SLC48A1Q6P1K1 146 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 GOT1L1Q8NHS2 421 aaPredicted RBP21.84■■□□□ 1.09
LSM4-202ENST00000593564 MBD3L2Q8NHZ7 208 aaPredicted RBP21.84■■□□□ 1.09
LSM4-202ENST00000593564 ABTB1Q969K4 478 aaPredicted RBP21.84■■□□□ 1.09
LSM4-202ENST00000593564 TRIB1Q96RU8 372 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 ELOVL6Q9H5J4 265 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 METTL7AQ9H8H3 244 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 CALHM2Q9HA72 323 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 NINJ2Q9NZG7 142 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 XPR1Q9UBH6 696 aa21.84■■□□□ 1.09
LSM4-202ENST00000593564 C1orf226A1L170 272 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 DIAPH2O60879 1101 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 SMIM24O75264 130 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 ATP1B1P05026 303 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 DNASE1P24855 282 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 TACR1P25103 407 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 MGAT2Q10469 447 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 MAP4K2Q12851 820 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 CEBPEQ15744 281 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 WIPI1Q5MNZ9 446 aaPredicted RBP21.83■■□□□ 1.09
LSM4-202ENST00000593564 UBAP2Q5T6F2 1119 aaKnown RBP21.83■■□□□ 1.09
LSM4-202ENST00000593564 NUP54Q7Z3B4 507 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 COMMD6Q7Z4G1 85 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 OR1J4Q8NGS1 313 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 SLC44A1Q8WWI5 657 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 HGDQ93099 445 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 FUT8Q9BYC5 575 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 ZNF639Q9UID6 485 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 PLEKHA6Q9Y2H5 1048 aa21.83■■□□□ 1.09
LSM4-202ENST00000593564 EXPH5Q8NEV8 1989 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 CTSSP25774 331 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 OPRM1P35372 400 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 NAGLUP54802 743 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 NNATQ16517 81 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 TSNAXIP1Q2TAA8 658 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 SGO1Q5FBB7 561 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 SLC30A6Q6NXT4 461 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 FAM111BQ6SJ93 734 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 ANGPTL8Q6UXH0 198 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 SYT10Q6XYQ8 523 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 MILR1Q7Z6M3 343 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 KIF18BQ86Y91 864 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 RELL1Q8IUW5 271 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 FAM83FQ8NEG4 500 aaPredicted RBP21.82■■□□□ 1.08
LSM4-202ENST00000593564 OR4F6Q8NGB9 312 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 ALPK1Q96QP1 1244 aa21.82■■□□□ 1.08
LSM4-202ENST00000593564 ITPAQ9BY32 194 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms