RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 B4E171 279 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 B8ZZF3 427 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 CXCR6O00574 342 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 CSO75390 466 aaKnown RBP12.6□□□□□ -0.39
VMP1-217ENST00000593168 SCRG1O75711 98 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 KRT36O76013 467 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 BMP10O95393 424 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 UMPSP11172 480 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 NCK1P16333 377 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 FBLP22087 321 aaKnown RBP12.6□□□□□ -0.39
VMP1-217ENST00000593168 TSPAN7P41732 249 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 CRATP43155 626 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 POLE2P56282 527 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 AP2B1P63010 937 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 ID2Q02363 134 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 STX4Q12846 297 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 SLC13A2Q13183 592 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 SERTAD2Q14140 314 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
VMP1-217ENST00000593168 ZNF628Q5EBL2 1059 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 COX20Q5RI15 118 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 GCNT6Q5T4J0 391 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 IRAK1BP1Q5VVH5 260 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 PWWP2BQ6NUJ5 590 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 TMEM107Q6UX40 140 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 CYP2R1Q6VVX0 501 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 PTOV1Q86YD1 416 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 SPPL2CQ8IUH8 684 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 TMEM126BQ8IUX1 230 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 ST13P4Q8IZP2 240 aaPredicted RBP12.6□□□□□ -0.39
VMP1-217ENST00000593168 C11orf65Q8NCR3 313 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 ZNF675Q8TD23 568 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 NSMCE2Q96MF7 247 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 DEPDC7Q96QD5 511 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 CMKLR1Q99788 373 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 STRADBQ9C0K7 418 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 POLR1BQ9H9Y6 1135 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 MKKSQ9NPJ1 570 aaPredicted RBP12.6□□□□□ -0.39
VMP1-217ENST00000593168 ASCL3Q9NQ33 180 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 THUMPD1Q9NXG2 353 aaKnown RBP12.6□□□□□ -0.39
VMP1-217ENST00000593168 PTGFRNQ9P2B2 879 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 STX18Q9P2W9 335 aaKnown RBP12.6□□□□□ -0.39
VMP1-217ENST00000593168 FAF1Q9UNN5 650 aaPredicted RBP12.6□□□□□ -0.39
VMP1-217ENST00000593168 CLDN16Q9Y5I7 305 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 SCN2AQ99250 2005 aa12.6□□□□□ -0.39
VMP1-217ENST00000593168 TCRBV5S2A0A599 114 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 POLR1CO15160 346 aaPredicted RBP12.59□□□□□ -0.39
VMP1-217ENST00000593168 KLK10O43240 276 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 PLOD3O60568 738 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 CREG1O75629 220 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 NUDT7P0C024 238 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 ETFAP13804 333 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 NT5EP21589 574 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 GALNSP34059 522 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 PCGF2P35227 344 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 MC3RP41968 323 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 PRIM2P49643 509 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 ANXA11P50995 505 aaKnown RBP12.59□□□□□ -0.39
VMP1-217ENST00000593168 MAPK10P53779 464 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 DSTNP60981 165 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 MGAT2Q10469 447 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 TP53BP2Q13625 1128 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 ERV3-1Q14264 604 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 SNCBQ16143 134 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 ZNF630Q2M218 657 aaPredicted RBP12.59□□□□□ -0.39
VMP1-217ENST00000593168 PRICKLE4Q2TBC4 344 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 CEACAM20Q6UY09 585 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 QSOX2Q6ZRP7 698 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 SLC30A8Q8IWU4 369 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 OR2L13Q8N349 312 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 MIPOL1Q8TD10 442 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 SNRNP27Q8WVK2 155 aaKnown RBP12.59□□□□□ -0.39
VMP1-217ENST00000593168 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.59□□□□□ -0.39
VMP1-217ENST00000593168 PYDC1Q8WXC3 89 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 FIG4Q92562 907 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 RSRC1Q96IZ7 334 aaKnown RBP12.59□□□□□ -0.39
VMP1-217ENST00000593168 SLC35G5Q96KT7 338 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 PELOQ9BRX2 385 aaKnown RBP12.59□□□□□ -0.39
VMP1-217ENST00000593168 YIPF2Q9BWQ6 316 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 ALOXE3Q9BYJ1 711 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 TGIF2Q9GZN2 237 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 LANCL2Q9NS86 450 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 TRPC4Q9UBN4 977 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 C19orf53Q9UNZ5 99 aaPredicted RBP12.59□□□□□ -0.39
VMP1-217ENST00000593168 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 NAV2Q8IVL1 2488 aa12.59□□□□□ -0.39
VMP1-217ENST00000593168 HECTD1Q9ULT8 2610 aa12.58□□□□□ -0.39
VMP1-217ENST00000593168 IGLV3-12A0A075B6K2 115 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 A0A1W2PNU3 283 aaPredicted RBP12.58□□□□□ -0.4
VMP1-217ENST00000593168 H3BNX3 289 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 UPK1AO00322 258 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 OR10H2O60403 315 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 TIAF1O95411 115 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 GPIP06744 558 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 ARAFP10398 606 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 MATN1P21941 496 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 SLC7A1P30825 629 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 RORAP35398 523 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 SOX18P35713 384 aa12.58□□□□□ -0.4
VMP1-217ENST00000593168 SOX11P35716 441 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms