RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 OR10H2O60403 315 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 LMX1BO60663 402 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 KERAO60938 352 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 RCBTB2O95199 551 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 LRATO95237 230 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 SLC16A8O95907 504 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 C1QAP02745 245 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 F7P08709 466 aaPredicted RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 DANCRP0C864 163 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 SLC35E2BP0CK96 405 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 MYL2P10916 166 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 CCND1P24385 295 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 CRHR1P34998 444 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 CD79BP40259 229 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 ARL1P40616 181 aaPredicted RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 PIK3CGP48736 1102 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 HNMTP50135 292 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 CLCN7P51798 805 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 PNLIPRP1P54315 467 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 MTTPP55157 894 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 MAGOHP61326 146 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 NAA20P61599 178 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 RPS15AP62244 130 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 KCNJ2P63252 427 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 LOXL1Q08397 574 aaPredicted RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 GBX1Q14549 363 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 ZNF791Q3KP31 576 aaPredicted RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 DEFB134Q4QY38 66 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 NHSL2Q5HYW2 709 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 CFAP157Q5JU67 520 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 THEMIS2Q5TEJ8 643 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 ZNF549Q6P9A3 640 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 LYPD8Q6UX82 237 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 SH2D5Q6ZV89 423 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 UBE2R2Q712K3 238 aaPredicted RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 PIWIL4Q7Z3Z4 852 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 SLC22A9Q8IVM8 553 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 SCUBE1Q8IWY4 988 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 PM20D2Q8IYS1 436 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 KIRREL3Q8IZU9 778 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 C4orf33Q8N1A6 199 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 PLD6Q8N2A8 252 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 SEMA6DQ8NFY4 1073 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 OR10H5Q8NGA6 315 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 OR9A1PQ8NGU1 263 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 RHEBL1Q8TAI7 183 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 FAM76AQ8TAV0 307 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 RDH11Q8TC12 318 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 PAQR8Q8TEZ7 354 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 ZNF480Q8WV37 535 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 EEF1AKMT1Q8WVE0 214 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 KCTD4Q8WVF5 259 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 EXT2Q93063 718 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 PDLIM5Q96HC4 596 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 SGCZQ96LD1 299 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 QRFPRQ96P65 431 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 PKP4Q99569 1192 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 PAIP2Q9BPZ3 127 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 TUBA1CQ9BQE3 449 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 UGT2B28Q9BY64 529 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 MRPL46Q9H2W6 279 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 UBQLN3Q9H347 655 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 PARVBQ9HBI1 364 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 MKS1Q9NXB0 559 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 ARL15Q9NXU5 204 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 UTP6Q9NYH9 597 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 WWOXQ9NZC7 414 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 BOKQ9UMX3 212 aaPredicted RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 SLC6A5Q9Y345 797 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 ANGPTL3Q9Y5C1 460 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 TNPO3Q9Y5L0 923 aaKnown RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 MAGED1Q9Y5V3 778 aaPredicted RBP5.53□□□□□ -1.52
VPS25-204ENST00000589577 CADP27708 2225 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 A0A1W2PNV4 684 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 TMEM120BA0PK00 339 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 FAM234BA2RU67 622 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 NPEPPSL1A6NEC2 478 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 UBFD1O14562 309 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 MSTNO14793 375 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 TMPRSS2O15393 492 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 H2AFYO75367 372 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 TRIM3O75382 744 aaPredicted RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 SPAG7O75391 227 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 CCNDBP1O95273 360 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 GDF1P27539 372 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 GCAP28676 217 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 MAGEA12P43365 314 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 HNRNPFP52597 415 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 PRKAA2P54646 552 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 ABATP80404 500 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 ZNF460Q14592 562 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 ARHGAP19Q14CB8 494 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 HERC3Q15034 1050 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 TSNQ15631 228 aaKnown RBP5.52□□□□□ -1.53
VPS25-204ENST00000589577 ACSBG2Q5FVE4 666 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 CDKL4Q5MAI5 379 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 FNDC7Q5VTL7 733 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 ANKRD34AQ69YU3 496 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 SULT1C3Q6IMI6 304 aa5.52□□□□□ -1.53
VPS25-204ENST00000589577 VWA1Q6PCB0 445 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms