RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 NCBP2P52298 156 aaKnown RBP eCLIP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 CASP6P55212 293 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 PER3P56645 1201 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 KCNJ2P63252 427 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 MGAT2Q10469 447 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 RPS6KA2Q15349 733 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF791Q3KP31 576 aaPredicted RBP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 TRMT12Q53H54 448 aaKnown RBP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF628Q5EBL2 1059 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 TNFAIP8L3Q5GJ75 292 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 BEND6Q5SZJ8 279 aaPredicted RBP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 PRAMEF20Q5VT98 475 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 LYPD8Q6UX82 237 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 TMEM64Q6YI46 380 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 Q6ZSR9 355 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 GHDCQ8N2G8 530 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 ANKRD42Q8N9B4 389 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 OR10G3Q8NGC4 313 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF675Q8TD23 568 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 KAT2AQ92830 837 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 GFM2Q969S9 779 aaKnown RBP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 TP53INP1Q96A56 240 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 PAIP2Q9BPZ3 127 aaKnown RBP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 RYDENQ9NUL5 291 aaKnown RBP13.67□□□□□ -0.22
ATG4D-207ENST00000587256 PRODH2Q9UF12 536 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 TMED5Q9Y3A6 229 aa13.67□□□□□ -0.22
ATG4D-207ENST00000587256 ZGRF1Q86YA3 2104 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 A0A1B0GUH1 482 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 PINLYPA6NC86 204 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 TMEM114B3SHH9 223 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 TP53I11O14683 189 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 ASNA1O43681 348 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 SLC19A2O60779 497 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 LYPLA1O75608 230 aaPredicted RBP13.66□□□□□ -0.22
ATG4D-207ENST00000587256 WISP2O76076 250 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 LRATO95237 230 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 JUNP05412 331 aaKnown RBP13.66□□□□□ -0.22
ATG4D-207ENST00000587256 STSP08842 583 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 ABOP16442 354 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 SDC1P18827 310 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 CNR1P21554 472 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 MAPK1P28482 360 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 HSF1Q00613 529 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 DUSP8Q13202 625 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 KIAA0040Q15053 153 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.66□□□□□ -0.22
ATG4D-207ENST00000587256 UGT3A2Q3SY77 523 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 HHATQ5VTY9 493 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 SLC22A10Q63ZE4 541 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 FJX1Q86VR8 437 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 PRR22Q8IZ63 422 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 FBXW8Q8N3Y1 598 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 SIMC1Q8NDZ2 872 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 C17orf47Q8NEP4 570 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 CLHC1Q8NHS4 586 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATG4D-207ENST00000587256 PAQR8Q8TEZ7 354 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 CTHRC1Q96CG8 243 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 ERP27Q96DN0 273 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 PPP3R2Q96LZ3 170 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 TSSK3Q96PN8 268 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 TTTY12Q9BZ98 90 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 NXF5Q9H1B4 397 aaKnown RBP13.66□□□□□ -0.22
ATG4D-207ENST00000587256 GIMAP2Q9UG22 337 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF639Q9UID6 485 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 ZDHHC2Q9UIJ5 367 aa13.66□□□□□ -0.22
ATG4D-207ENST00000587256 USP9YO00507 2555 aaPredicted RBP13.66□□□□□ -0.22
ATG4D-207ENST00000587256 SETXQ7Z333 2677 aaKnown RBP13.66□□□□□ -0.22
ATG4D-207ENST00000587256 SPTBN1Q01082 2364 aaKnown RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 DOPEY1Q5JWR5 2465 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 ATP6AP2A0A1C7CYW4 349 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 MYO1GB0I1T2 1018 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 PDPK1O15530 556 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 AKAP10O43572 662 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 ATP6AP2O75787 350 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 BCAS2O75934 225 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 LDLRP01130 860 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 DHRS4L1P0CG22 281 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 RNF224P0DH78 156 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 PIGAP37287 484 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 FBXW4P57775 412 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 ABCE1P61221 599 aaKnown RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 PPIAP62937 165 aaKnown RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 PLCXD2Q0VAA5 305 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 ZNF155Q12901 538 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 MPP2Q14168 576 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 CEBPEQ15744 281 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 NTRK2Q16620 822 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 ATP6AP1LQ52LC2 224 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 RFTN2Q52LD8 501 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 XKR7Q5GH72 579 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 BNC2Q6ZN30 1099 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 SLC22A16Q86VW1 577 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 OR6Y1Q8NGX8 325 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 MGARPQ8TDB4 240 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 DIO2Q92813 273 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 ADIPOR1Q96A54 375 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 PPCDCQ96CD2 204 aa13.65□□□□□ -0.22
ATG4D-207ENST00000587256 LCORQ96JN0 433 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-207ENST00000587256 EGLN2Q96KS0 407 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms