RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 LILRA5A6NI73 299 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 TRMUO75648 421 aaKnown RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 RECKO95980 971 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 ADAP00813 363 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 PDGFBP01127 241 aaPredicted RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 CSF2P04141 144 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 H1F0P07305 194 aaKnown RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 C8orf89P0DMQ9 161 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 CYP4B1P13584 511 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 NME1P15531 152 aaKnown RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 PORP16435 677 aaPredicted RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 CBLP22681 906 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 DCKP27707 260 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 IFNA8P32881 189 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 FASLGP48023 281 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 XKP51811 444 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 RACK1P63244 317 aaKnown RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 MVKQ03426 396 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 PMS2P3Q13401 168 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 RUNX2Q13950 521 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 PUM1Q14671 1186 aaKnown RBP eCLIP10.59□□□□□ -0.71
LIG3-204ENST00000585740 GPR19Q15760 415 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 NEDD8Q15843 81 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 DEFB134Q4QY38 66 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 GPAT3Q53EU6 434 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 DCST1Q5T197 706 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 CDC73Q6P1J9 531 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 ZCCHC12Q6PEW1 402 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 SLC36A4Q6YBV0 504 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 P3H2Q8IVL5 708 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 SPARTQ8N0X7 666 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 CSNK1A1LQ8N752 337 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 BPIFB6Q8NFQ5 453 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 OR13F1Q8NGS4 319 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 OR9A2Q8NGT5 310 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 PATE1Q8WXA2 126 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 KLHL6Q8WZ60 621 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 TANKQ92844 425 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 ISOC1Q96CN7 298 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 MPP4Q96JB8 637 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 MS4A4EQ96PG1 132 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 FCRL4Q96PJ5 515 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 TRNT1Q96Q11 434 aaKnown RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 ALPK1Q96QP1 1244 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 OR7D2Q96RA2 312 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 DOK1Q99704 481 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 LRRC61Q9BV99 259 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 FANCEQ9HB96 536 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 GIN1Q9NXP7 522 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 SLC13A4Q9UKG4 626 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 ACAD8Q9UKU7 415 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
LIG3-204ENST00000585740 RIF1Q5UIP0 2472 aaKnown RBP10.59□□□□□ -0.71
LIG3-204ENST00000585740 FAM170BA6NMN3 283 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 ENO4A6NNW6 628 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 B4DGG1 531 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 GALR2O43603 387 aaPredicted RBP10.58□□□□□ -0.72
LIG3-204ENST00000585740 MPZL2O60487 215 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 FAM20BO75063 409 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 SEC14L2O76054 403 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 SOX30O94993 753 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 LGI1O95970 557 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 ALPPP05187 535 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 CHRM4P08173 479 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 CELA2BP08218 269 aaPredicted RBP10.58□□□□□ -0.72
LIG3-204ENST00000585740 ITIH1P19827 911 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 AGXTP21549 392 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 CDH3P22223 829 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 MC3RP41968 323 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 LSSP48449 732 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 UGT2B15P54855 530 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 TMBIM6P55061 237 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 RAB38P57729 211 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 HPCAP84074 193 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 DUSP2Q05923 314 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 C1orf61Q13536 156 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 GAS6Q14393 721 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 NDUFA9Q16795 377 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 FAM214AQ32MH5 1076 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 ZNF542PQ5EBM4 170 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 MLIPQ5VWP3 458 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 CWF19L1Q69YN2 538 aaKnown RBP10.58□□□□□ -0.72
LIG3-204ENST00000585740 FRMPD2BQ6IN97 320 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 LAIR2Q6ISS4 152 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 TCTN3Q6NUS6 607 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 DHRS4L2Q6PKH6 230 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 C16orf62Q7Z3J2 963 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 B3GNT8Q7Z7M8 397 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 CAMKK1Q8N5S9 505 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 OR5D16Q8NGK9 328 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 OR52J3Q8NH60 311 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 CNIH3Q8TBE1 160 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 ADAMTS15Q8TE58 950 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 ADAMTS18Q8TE60 1221 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 SPACA7Q96KW9 195 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 BCL7BQ9BQE9 202 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 TPSD1Q9BZJ3 242 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 DUSP21Q9H596 190 aa10.58□□□□□ -0.72
LIG3-204ENST00000585740 PLCXD1Q9NUJ7 323 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms