RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 C16orf78Q8WTQ4 265 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 MARVELD3Q96A59 401 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 APIPQ96GX9 242 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 JSRP1Q96MG2 331 aaPredicted RBP11.4□□□□□ -0.59
SS18-225ENST00000585121 SMC6Q96SB8 1091 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 DMRTA2Q96SC8 542 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 SECISBP2Q96T21 854 aaKnown RBP11.4□□□□□ -0.59
SS18-225ENST00000585121 DOHHQ9BU89 302 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 SHCBP1LQ9BZQ2 653 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 OXSMQ9NWU1 459 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 MAT2BQ9NZL9 334 aa11.4□□□□□ -0.59
SS18-225ENST00000585121 CHCHD2Q9Y6H1 151 aaPredicted RBP11.4□□□□□ -0.59
SS18-225ENST00000585121 PCNX1Q96RV3 2341 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 ANKRD33BA6NCL7 494 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 SUSD5O60279 629 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 HCN1O60741 890 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 IGHG3P01860 377 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 UROSP10746 265 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 S1PR1P21453 382 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 GPX3P22352 226 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 MPIP34949 423 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 DCAF7P61962 342 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 RAE1P78406 368 aaKnown RBP11.39□□□□□ -0.59
SS18-225ENST00000585121 SLC18A2Q05940 514 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 GTF3C1Q12789 2109 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 GALNT18Q6P9A2 607 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 FAM111BQ6SJ93 734 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 TMEM64Q6YI46 380 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 TRILQ7L0X0 811 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 PACS2Q86VP3 889 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 CCDC116Q8IYX3 515 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 LIX1Q8N485 282 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 ADCY4Q8NFM4 1077 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 CDC26Q8NHZ8 85 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 FAM76AQ8TAV0 307 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 CA5BP1Q8WTZ4 195 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 ADIPOR1Q96A54 375 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 EXOSC8Q96B26 276 aaKnown RBP11.39□□□□□ -0.59
SS18-225ENST00000585121 SARAFQ96BY9 339 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 HSPBAP1Q96EW2 488 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 ZNF597Q96LX8 424 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 BBS4Q96RK4 519 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 QPCTLQ9NXS2 382 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 SENP1Q9P0U3 644 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 ACAD8Q9UKU7 415 aa11.39□□□□□ -0.59
SS18-225ENST00000585121 CNOT11Q9UKZ1 510 aaKnown RBP11.39□□□□□ -0.59
SS18-225ENST00000585121 WBP11Q9Y2W2 641 aaKnown RBP11.39□□□□□ -0.59
SS18-225ENST00000585121 TEX15Q9BXT5 2789 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 TRGV5A0A0B4J1U4 118 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 A0A1B0GVC2 190 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 FIGNL2A6NMB9 653 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 AQP7O14520 342 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 UBFD1O14562 309 aaKnown RBP11.38□□□□□ -0.59
SS18-225ENST00000585121 ADAM10O14672 748 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 ACOX3O15254 700 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 SNX4O95219 450 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 CHEK2O96017 543 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 NUDT17P0C025 328 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 COX6B1P14854 86 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 NAGAP17050 411 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 MASP1P48740 699 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 FOXA1P55317 472 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 FBXW4P57775 412 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 ZNF763Q0D2J5 394 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 C2orf80Q0P641 193 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 MGAT2Q10469 447 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 EXOSC7Q15024 291 aaKnown RBP11.38□□□□□ -0.59
SS18-225ENST00000585121 GXYLT1Q4G148 440 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 BEND6Q5SZJ8 279 aaPredicted RBP11.38□□□□□ -0.59
SS18-225ENST00000585121 WLSQ5T9L3 541 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 FAM219BQ5XKK7 198 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 EMBQ6PCB8 327 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 ACAD11Q709F0 780 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 OR52R1Q8NGF1 315 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 SPPL2AQ8TCT8 520 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 ASB5Q8WWX0 329 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 RND1Q92730 232 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 SDCCAG3Q96C92 435 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 ERP27Q96DN0 273 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 CNRIP1Q96F85 164 aaPredicted RBP11.38□□□□□ -0.59
SS18-225ENST00000585121 LCORQ96JN0 433 aaPredicted RBP11.38□□□□□ -0.59
SS18-225ENST00000585121 ZNF681Q96N22 645 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 TRMOQ9BU70 441 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 EBPLQ9BY08 206 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 ROPN1BQ9BZX4 212 aaPredicted RBP11.38□□□□□ -0.59
SS18-225ENST00000585121 ROPN1Q9HAT0 212 aaPredicted RBP11.38□□□□□ -0.59
SS18-225ENST00000585121 MIEF1Q9NQG6 463 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 SLC35C2Q9NQQ7 365 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 SIRT5Q9NXA8 310 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 EHD3Q9NZN3 535 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 HEY2Q9UBP5 337 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 ZNF639Q9UID6 485 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 PLLPQ9Y342 182 aa11.38□□□□□ -0.59
SS18-225ENST00000585121 CELSR2Q9HCU4 2923 aa11.37□□□□□ -0.59
SS18-225ENST00000585121 CRYBG3Q68DQ2 2970 aa11.37□□□□□ -0.59
SS18-225ENST00000585121 SLC28A1O00337 649 aa11.37□□□□□ -0.59
SS18-225ENST00000585121 TRIM13O60858 407 aa11.37□□□□□ -0.59
SS18-225ENST00000585121 RSL1D1O76021 490 aaKnown RBP11.37□□□□□ -0.59
SS18-225ENST00000585121 LRATO95237 230 aa11.37□□□□□ -0.59
SS18-225ENST00000585121 PCSK2P16519 638 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms