RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 HACD2Q6Y1H2 254 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 ZNF730Q6ZMV8 503 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 ARL14Q8N4G2 192 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 DGCR14Q96DF8 476 aaKnown RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 GSDMCQ9BYG8 508 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 LMAN2LQ9H0V9 348 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 OR51V1Q9H2C8 321 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 EPB41L1Q9H4G0 881 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 EGLN3Q9H6Z9 239 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 PSME2Q9UL46 239 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 IGF2RP11717 2491 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 TEX51A0A1B0GUA7 166 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 PRAMEF26H0Y7S4 382 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 WWP2O00308 870 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 GASTP01350 101 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 FCER2P06734 321 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 MRPL3P09001 348 aaKnown RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 CCNYL3P0C7X3 344 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 SAGP10523 405 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 CHRNB1P11230 501 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 PKLRP30613 574 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 TRPC1P48995 793 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 CLK1P49759 484 aaKnown RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 CRYBA2P53672 197 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 STXBP1P61764 594 aaKnown RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 NPTX1Q15818 432 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 TYW3Q6IPR3 259 aaKnown RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 REEP3Q6NUK4 255 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 DGAT2L6Q6ZPD8 337 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 LRRC56Q8IYG6 542 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 SLC34A3Q8N130 599 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 STON2Q8WXE9 905 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 TESCQ96BS2 214 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 FAM46AQ96IP4 442 aaKnown RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 NECTIN4Q96NY8 510 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 BTBD9Q96Q07 612 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 ZFYVE21Q9BQ24 234 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 NUDT22Q9BRQ3 303 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 DOHHQ9BU89 302 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 KIR3DX1Q9H7L2 352 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 ARMC1Q9NVT9 282 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 SNX7Q9UNH6 387 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 PCDHGA4Q9Y5G9 962 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 IGHV5-51A0A0C4DH38 117 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 TMEM150CB9EJG8 249 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 BOLA2-SMG1P6H3BVE0 249 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 UPK1AO00322 258 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 MAGEB4O15481 346 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 GCM2O75603 506 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 UGT2B17O75795 530 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 GRPRP30550 384 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 ODF4Q2M2E3 257 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 HYAL4Q2M3T9 481 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 C8orf82Q6P1X6 216 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 PLEKHM3Q6ZWE6 761 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 NRROSQ86YC3 692 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 HIPK1Q86Z02 1210 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 ZCCHC7Q8N3Z6 543 aaKnown RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 LINC00471Q8N535 108 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 OR2L5Q8NG80 312 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 CHCHD6Q9BRQ6 235 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 SERHL2Q9H4I8 314 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 NMNAT1Q9HAN9 279 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 SIT1Q9Y3P8 196 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 A0A1W2PPC1 479 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 A0A1W2PPK0 400 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 TTC36A6NLP5 189 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 RGS5O15539 181 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 KLHL18O94889 574 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 SDHBP21912 280 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 NAA20P61599 178 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 KIF26BQ2KJY2 2108 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 SLC30A6Q6NXT4 461 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 ZAR1Q86SH2 424 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 OR2A14Q96R47 310 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 RBM4BQ9BQ04 359 aaKnown RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 RBM4Q9BWF3 364 aaKnown RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 DSN1Q9H410 356 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 MED20Q9H944 212 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 ZBTB20Q9HC78 741 aaPredicted RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 ANKHQ9HCJ1 492 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 SPATA7Q9P0W8 599 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 ERVK-19Q9WJR5 959 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 WDR45Q9Y484 360 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 ATRXP46100 2492 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 G3V3Y1 287 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 H3BNH8 94 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 MT-ND2P03891 347 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 CHRM4P08173 479 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 CD247P20963 164 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 XCR1P46094 333 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 HSPA13P48723 471 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 LIM2P55344 173 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 RAB39AQ14964 217 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 KIAA0895LQ68EN5 471 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 EIF3MQ7L2H7 374 aaKnown RBP9.66□□□□□ -0.86
RFFL-212ENST00000584655 OR8J2Q8NGG1 315 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 OR5K1Q8NHB7 308 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 VMP1Q96GC9 406 aa9.66□□□□□ -0.86
RFFL-212ENST00000584655 CD320Q9NPF0 282 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms